Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02073 ATGGCCTCTACTTCTTCCGGGAGACACCCCGTGTATCGTGGAATCAGGTGCCGCGGCGGAAAATGGGTGTCCGAGATCCGAGAGCCACGTAAGACGTCACGCATATGGCTGGGCACATTCCCCACCCCAGAGATGGCGGCTGCTGCCTATGACGTGGCTTCTTTGGCCCTCAAGGGCAGTGGTGCCGTTCCCAACTTCCCGGGTTTAGTTGAGAGGTACCCAAGACCCTTGTCCACATCAGCTGCTGACATTCGTAATGCCGCCAGTGCTGCAGCAGCATTAGTGAGAGCAGATGATCAATCGAGCCACAATGTTAATGATGAATCGGCAGCGATAAATGATCAACCAGATAATAATACTAATTACGCTATAATTCCATCATCTTCGGGAACAGAGTTTTTGGACGAGGAGGCTATATTCGGTATGCCAGCTTTGCTGGTGGACATGGCTGGGGGAATGCTGCTCTCCCCTCCCAGAATAACCTCGCCTCTTTCCGATAACTCTCCTAACGCAGAAACTCTATGGAGCTATTTTTG 536 0.5187 MASTSSGRHPVYRGIRCRGGKWVSEIREPRKTSRIWLGTFPTPEMAAAAYDVASLALKGSGAVPNFPGLVERYPRPLSTSAADIRNAASAAAALVRADDQSSHNVNDESAAINDQPDNNTNYAIIPSSSGTEFLDEEAIFGMPALLVDMAGGMLLSPPRITSPLSDNSPNAETLWSYF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02073 178 Gene3D AP2/ERF domain 11 68 IPR036955 GO:0003700|GO:0006355
Bva11g02073 178 MobiDBLite consensus disorder prediction 99 119 - -
Bva11g02073 178 MobiDBLite consensus disorder prediction 104 119 - -
Bva11g02073 178 CDD AP2 12 67 IPR001471 GO:0003700|GO:0006355
Bva11g02073 178 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 178 - -
Bva11g02073 178 SMART rav1_2 11 73 IPR001471 GO:0003700|GO:0006355
Bva11g02073 178 ProSiteProfiles AP2/ERF domain profile. 11 67 IPR001471 GO:0003700|GO:0006355
Bva11g02073 178 PANTHER ETHYLENE RESPONSE FACTOR 2 178 - -
Bva11g02073 178 SUPERFAMILY DNA-binding domain 11 67 IPR016177 GO:0003677
Bva11g02073 178 Pfam AP2 domain 10 59 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02073 Bva-Chr11 17327559 17328701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02073 2 177 AP2-EREBP Transcription Factor Family AT5G52020 54.396 1.56e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva11g02073 AP2 3.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02073 - - gmx:100811020 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02073 11 17327559 17328701 Bva08g00217 08 1052987 1054462 BWGD
Bva11g02073 11 17327559 17328701 Bva11g02073 11 17327559 17328701 ECH