Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02072 ATGCAGGACATTTTTAGACAATCGTTTGACGAATCGAACTACGGATGCGGATTTAGTCACGATAAGTCAGAGGGGTCTTCGTCGTCGGAAACAAGCTCCTCTACCCGCCCGATTCCTCACTACTCTGACGAGGAAGAATCGGTGAATCTAGCATCGTCCACCCCCAAGAAGCGAGCAGGCCGCAGAATATTCAAGGAGACCAGACATCCCGTTTACCGAGGAGTGCGTCGGAGGAACAATAACAAGTGGGTTTGCGAGTTGCGTGTCCCCAATGACAAAGCAAGAATTTGGCTCGGAACCTACCCAACGCCCGAGATGGCTGCACGAGCTCATGACGTGGCCGCGCTGGCACTTCGGGGAAAATCGGCTTGCCTCAATTTCGCTGACTCGGCTTGGCGCCTGCCTTTGCCGGCTTCTACCGATGCGGGCGAGATCAGGAGAGTGGCCGTTATGGCTGCTAACCAATTCGGGCACGTCCACCAACAGTATCCAGAGCAGATCAATGCAAACGACGCTGCTGATATTGATCGAGTTTGTAGCAGCAGCGCAGGCAGGCCCACGCAACAAGAGGCTGTTCACGATGACTTGTATGATTTGCTTATGACTATGGCAGAAGAGCCTTTGAGGTCTCCACCTCCTGTCGTGAGAGATGGTAGGGACTGGAATGACGTGGACCTTGACGCTGAGGTGTCATTGTGGAGCTTCTCCATTTG 713 0.5358 MQDIFRQSFDESNYGCGFSHDKSEGSSSSETSSSTRPIPHYSDEEESVNLASSTPKKRAGRRIFKETRHPVYRGVRRRNNNKWVCELRVPNDKARIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLPLPASTDAGEIRRVAVMAANQFGHVHQQYPEQINANDAADIDRVCSSSAGRPTQQEAVHDDLYDLLMTMAEEPLRSPPPVVRDGRDWNDVDLDAEVSLWSFSI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02072 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 3 237 - -
Bva11g02072 237 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Bva11g02072 237 Gene3D AP2/ERF domain 71 129 IPR036955 GO:0003700|GO:0006355
Bva11g02072 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 237 IPR045277 GO:0003700
Bva11g02072 237 CDD AP2 72 130 IPR001471 GO:0003700|GO:0006355
Bva11g02072 237 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Bva11g02072 237 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Bva11g02072 237 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Bva11g02072 237 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Bva11g02072 237 MobiDBLite consensus disorder prediction 1 38 - -
Bva11g02072 237 MobiDBLite consensus disorder prediction 1 65 - -
Bva11g02072 237 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02072 Bva-Chr11 17322615 17323890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02072 44 235 AP2-EREBP Transcription Factor Family AT1G63030 52.525 1.26e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva11g02072 AP2 2.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02072 - - gmx:100789097 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02072 11 17322615 17323890 Bva08g00218 08 1058703 1059728 BWGD
Bva11g02072 11 17322615 17323890 Bva11g02072 11 17322615 17323890 ECH