Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02063 ATGGctcattctttttttggtgGAACTCTATCTTTTGGAGGCTCAAGCCATGGACAGGGTCAACAGGCTGTGCCCTTTCCTACGACTACGAGTTCCTTAAGAATTTTGCTTTTACATGGCAACTTAGAGATATACGTCAAAGAGGCCAAAAGCCTTCCTAACATGGATATGTTTCACAAGAATATGAGTGATATGTTTTCCAAATTACCTGGAAAACTTGGCAAAAATGTTGGAGGGCATATGTCCCATAAGTTAACCAGTGATCCATATACAACTGTATCAGTAGCAGGTACTGTAATTGCGAGGACATTTGTGATCAGAAATGATGAAAACCCTGTCTGGGTGCAGTATTTTAATGTTCCTGTTGCGCATTATGCTTCGGAAGTTCACTTTGTTGTGAAAGATGATGATGTAGTGGGCTCACAGATTATTGGTGCTGTGGGAATACCAGTGGAACAGCTATATACCGGCACAAAAGTGGAGGGAACTTTTCCCATCCTTACTGCTGGTGGGAAGCCTTGTAAGGCTGGGGCGGTTTTGAGTTTATCCATTCAATATACGCCATTTCATAAACTGGCTCTTTACCATCATGGAGTAGGTGGAGGTCCTGATCATGAAGGGGTCCCTGGTACATACTTTCCCCTTAGGAAAGGAGGCAAAGTCAAACTTTATCAAGATGCTCATGCTCCCCAAGGTTGCCTCGCCAATTTGAAGATCGATggtaatttaaattatgagcATGGCAACTGTTGGCACGACATCTTTGATGCTATAAGTCAGGCCCgcaaattaatatacatcGTAGGGTGGTCTGTATACTACAATGTTAAACTGATTCGCGATGGCAATGATGAAAAATCTTGCACTTTAGGTGATCTCCTCAAGACTAAATCCCAGGAAGGTGTGAGAGTGCTGCTTCTTGTATGGGATGATCCTACTTCTCGAAGCATCCTTGGATATAAAATGGACGGAAAAATGAACACTCATGATGAGGACACTCGTCGTTTTTTCAAGCACTCTTCCGTACGAGTCCTACTTTGCCCACGAACTGGTGGAAAAGGACATAGTTGGATCAAGAAGCCGGAAGCTGGAACAATCTATACCCATCATCAGAAAACAGTCATTGTGGATGCGGATGCAGGCGAAGgcgaaaataaaagaaagattataGCTTTCGTTGGAGGTCTTGATTTATGCATGGGGCGATATGATACACCACATCATTCTCTCTTTAGGACTTTGCATACAACGCACAAAGAGGACTATCATAACCCTAACTTCAAGGGGCCTGTGGATGGTTGTCCAAGACAACCATGGCATGATTTGCATTCGCAAATTGATGGTCCAGCTGCATATGACATCCTCACCAACTTTGAGGAACGTTGGTTAAGGGCATCAAAGGTGTCTGGACTTCGGAAGATGAAAAGTTCATATGATGATTCATTACTGAATATAAGTAGAATTCCTGACATCATTGGTATTGCTGATGTTCCTTCCTTAGATAAAGATAAGCCAGATAATTGGCATATCCAGaTCTTCCGTTCGATTGACTCCAATTCAGTCAAAGGATTTCCGAAGGAACCAAAAGATGCTATAAAAAGGAACTTGGTTTGTGGGAAGAATGTACTGATAGACATGAGTATACATGCTGCATATGTCAAGGCAATCCGAGCCGCACAAAAGTTCATATATGTTGAGAACCAATACTTTCTTGGTTCGTCGTACAATTGGGATTCTTACAAAGATTTAGGTGCAAACAACTTAATTCCGATGGAAATTGCTCTCAAAATTGctaacaaaatcaaacaaaaggaGAGGTTCGCTGTGTACATTATCATCCCAATGTGGCCTGAAGGTGTACCCACAAGTACACCAACTCAACGGATTCTCTTTTGGCAGTTCAAAACAATGGAAATGATGTACGAAATGATTTACAAGGCTCTACAGGAGGCTGGACTTGACAATCAGTATGAACCACAAGACTACTTGAATTTCTTTTGCCTTGGCAAACGTGAGACACCAGAAAACGGAAACGATTTGAACGCTATAAATCCTACTGGAGCAAACACTCCTCAGGCACTTACACAAAAGAACCGGCGGTTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGACGAATACGTTATACTGGGATCTGCTAACATTAACCAGCGATCCATGGGAGGCACTAGAGATACAGAGATAGCAATGGGTGCATATCAGCCGCATCATACCTGGGCAACCAAGCACTCTAGACCTTGTGGACAGGTGTATGGATACAGAATGTCGCTATGGGACGAACACATAGGAGGTTTGGAAGAATGTTTCAAGCAACCAGAGAGCCTGGAATGCGTGAGACGGATAAGGTCCTTGAGTGAGCTTAATTGGAAAGAGTACGCAGCAAATGATCATTTAACCGAAATGAAAGGCCATCTATTAAAATACCCACTTCAAGTTGATTCCAATGGCAAAGTGAAGCCTCTTGCTGGCCATGAGACATTCCCGGATCTTGGCGGCAACATTAAAGGCACTTTTACAGGCATTCAAGAAAATCTCACCATATG 2570 0.4136 MAHSFFGGTLSFGGSSHGQGQQAVPFPTTTSSLRILLLHGNLEIYVKEAKSLPNMDMFHKNMSDMFSKLPGKLGKNVGGHMSHKLTSDPYTTVSVAGTVIARTFVIRNDENPVWVQYFNVPVAHYASEVHFVVKDDDVVGSQIIGAVGIPVEQLYTGTKVEGTFPILTAGGKPCKAGAVLSLSIQYTPFHKLALYHHGVGGGPDHEGVPGTYFPLRKGGKVKLYQDAHAPQGCLANLKIDGNLNYEHGNCWHDIFDAISQARKLIYIVGWSVYYNVKLIRDGNDEKSCTLGDLLKTKSQEGVRVLLLVWDDPTSRSILGYKMDGKMNTHDEDTRRFFKHSSVRVLLCPRTGGKGHSWIKKPEAGTIYTHHQKTVIVDADAGEGENKRKIIAFVGGLDLCMGRYDTPHHSLFRTLHTTHKEDYHNPNFKGPVDGCPRQPWHDLHSQIDGPAAYDILTNFEERWLRASKVSGLRKMKSSYDDSLLNISRIPDIIGIADVPSLDKDKPDNWHIQIFRSIDSNSVKGFPKEPKDAIKRNLVCGKNVLIDMSIHAAYVKAIRAAQKFIYVENQYFLGSSYNWDSYKDLGANNLIPMEIALKIANKIKQKERFAVYIIIPMWPEGVPTSTPTQRILFWQFKTMEMMYEMIYKALQEAGLDNQYEPQDYLNFFCLGKRETPENGNDLNAINPTGANTPQALTQKNRRFMIYVHSKGMIVDDEYVILGSANINQRSMGGTRDTEIAMGAYQPHHTWATKHSRPCGQVYGYRMSLWDEHIGGLEECFKQPESLECVRRIRSLSELNWKEYAANDHLTEMKGHLLKYPLQVDSNGKVKPLAGHETFPDLGGNIKGTFTGIQENLTI 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02063 856 Pfam C2 domain 40 166 IPR000008 -
Bva11g02063 856 Gene3D Endonuclease Chain A 514 752 - -
Bva11g02063 856 Pfam Phospholipase D Active site motif 366 402 IPR001736 GO:0003824
Bva11g02063 856 Pfam Phospholipase D Active site motif 702 728 IPR001736 GO:0003824
Bva11g02063 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 701 728 IPR001736 GO:0003824
Bva11g02063 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 402 IPR001736 GO:0003824
Bva11g02063 856 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 7 856 - -
Bva11g02063 856 CDD C2_plant_PLD 36 187 - -
Bva11g02063 856 SUPERFAMILY Phospholipase D/nuclease 212 468 - -
Bva11g02063 856 Gene3D C2 domain 35 176 IPR035892 -
Bva11g02063 856 SUPERFAMILY Phospholipase D/nuclease 548 786 - -
Bva11g02063 856 SMART pld_4 701 728 IPR001736 GO:0003824
Bva11g02063 856 SMART pld_4 365 402 IPR001736 GO:0003824
Bva11g02063 856 PIRSF PLD_plant 27 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva11g02063 856 Gene3D Endonuclease Chain A 236 482 - -
Bva11g02063 856 SMART C2_3c 41 163 IPR000008 -
Bva11g02063 856 ProSiteProfiles C2 domain profile. 21 164 IPR000008 -
Bva11g02063 856 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 188 IPR035892 -
Bva11g02063 856 Pfam Phospholipase D C terminal 775 846 IPR024632 -
Bva11g02063 856 PANTHER PHOSPHOLIPASE D 7 856 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02063 Bva-Chr11 17276123 17283250 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02063 32 856 Phospholipase D Gene Family (Wang group) AT2G42010 68.743 0.0 1264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02063 K01115 - gmx:100786241 1409.05