Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02061 ATGGCTCATTCTTTTTTCGGTGAAACTCTATCTTTTGGAGGCTCAAGCCATGGACAGGGTCAACAGGCTGTGCCCTTTCCTACGACTACGAGTTCCTTAAGAATTTTGCTCTTACATGGCAACTTAGAGATATACGTCAAAGAGGCCAAAAGCCTTCCTAACATGGATATGTTTCACAAGACCATGAGTGATATGTTCTCCAAATTACCTGGAAAACTTGGCAAAAATGTTGGAGGGCATATGTCCCATAAGTTAACCAGTGACCCATATACAACTGTATCAGTAGCAGGTACTGTAATTGCGAGGACATTTGTGATCAGAAATGATGAGAACCCTGTCTGGATGCAGCATTTTAATGTTCCTGTTGCGCATTATGCTTCGGAAATTCACTTTGTTGTGAAAGATGATGATGTAGTGGGCTCACAGATCATTGGTGCTGTGGGAATACCAGTGGAACAGCTATATACCGGCACAAAAGTGGAGGGAACTTTTCCCATCCTTACTGCTGGCGGGAAGCCTTGTAAGGCTGGAGCAGTTTTGAGTTTATCCATTCAATATATGCCATATGATAAACTGGCTCTTTACCATCATGGAGTAGATGGAGGTCCTGAACATGAAGGGGTCCCTGGTACATACTTTCCCCTTAGGAAAGGAGGCAAAGTCAAACTTTATCAAGATGCTCATGCTCCCCAAGGTTGCCTCACCAATTTGAAGATTGATGGTGATTTAAATTATGAGCATGGCAACTGTTGGCACGACATCTTTGATGCCATAAGTCAGGCCcgcaaattaatatatatcgtAGGGTGGTCTGTGTACTACAATGTTAAACTGATTCGCGATGGCAATGATGAAAAATCTTGCACTTTAGGTGATCTCCTCAAGACTAAATCCCAGGAAGGTGTGAGAGTGCTGCTTCTTGTATGGGATGATCCTACATCTCCAAGCGTCCTTGGATATAAAACGGACGGAATTATGAACACTCATGATGAGGACACTTGTCGTTTTTTCAAGCACTCTTCCGTACGAGTCCTACTTTGCCCACGAACTGGTGGAAAAGGACATAGTTGGATCAAGAAGCCGGAAGCTGGAACAATCTATACCCATCATCAGAAAACAGTCATTGTGGATGCGGATGCAggtcaaaataaaagaaagattataGCTTTCGTTGGAGGTCTTGATTTATGCATGGGGCGATATGATACACCACATCATTCTCTCTTTAGGACTTTGCATACAGCACACAAAGAGGACTATCATAACCCTAACTTCACGGGGCCTGTGGATGGTTGTCCAAGAGAACCATGGCATGATTTGCATTCCCAAATTGATGGTCCAGCTGCATATGACATCCTCACCAACTTTGAGGAACGTTGGTTAAGGGCATCAAAGGTGTCTGGACTTCGGAAGATGAAAAGTTCATATGATGATTCATTACTGAATATAAGTAGAATTCCTGACATCATTGGTATTGCTGATGTTCCTTCCTTAGATAAAGATAAGCCAGATAATTGGCATGTCCAGaTCTTCCGTTCGATTGACTCCAATTCTGTCATAGGATTTCCGAAGGAACCAAAAGATGCTATAAAAAGGAACTTGGTTTGTGGGAAGAATGTACTGATAGACATGAGTATACATGCTGCATATGTCAAGGCAATCCGAGCCGCACaaaagttcatatatattGAGAACCAATACTTTCTTGGTTCGTCGTACAATTGGGATAATTACAAAAACTTAGGTGCAAACAACTTAATTCCGATGGAAATTGCTCTTAAAATTGctaacaaaatcaaacaaaatgagaGGTTCGCTGTGTACATTATCATCCCAATGTGGCCTGAAGGTGTACCCACAAGTACACCAACTCAACGGATTCTCTTTTGGCAATTCAAAACAATGGAAATGATGTATGAAACGATTTACAAGGCTCTACAGGAGGCTGGACTTGACAATCAGTATGAACCACAAGACTACTTGAATTTCTTTTGCCTTGGCAATCGGGAGACACCAGATAACGGAAATGATTTGAACGCTAAAGATCCTACTGGAGCAAACACTCCTCAGGCACTTACTCAAAAGAACCGGCGGTTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGACGAATACGTTATATTGGGATCTGCTAACATTAACCAGCGATCCATGGAAGGCACTAGAGACACAGAGATAGCAATGGGTGCATATCAGCCGCATCATACCTGGGCAACCAAGCACTCTAGACCTTGTGGACAGGTGTATGGATACAGAATGTCGCTATGGGACGAACACATAGGAGGTTTGGAAGAATGTTTCAAGCAACCAGAGAGCCTGGAATGCGTGAGACGGATAAGGTCCTTGAGCGAGCTTAATTGGAAAGAGTACGCAGCAAATGATCATTTAACCGAAATGAAAGGCCATCTATTAAAATACCCACTTCAAGTTGATTCCAATGGCAAAGTGAAGCCTCTTGCTGGCCATGAGACATTCCCGGATCTTGGCGGCAACATTAAAGGCACTTTTACAGGCATTCAAGAAAATCTCACCATATG 2564 0.4165 MAHSFFGETLSFGGSSHGQGQQAVPFPTTTSSLRILLLHGNLEIYVKEAKSLPNMDMFHKTMSDMFSKLPGKLGKNVGGHMSHKLTSDPYTTVSVAGTVIARTFVIRNDENPVWMQHFNVPVAHYASEIHFVVKDDDVVGSQIIGAVGIPVEQLYTGTKVEGTFPILTAGGKPCKAGAVLSLSIQYMPYDKLALYHHGVDGGPEHEGVPGTYFPLRKGGKVKLYQDAHAPQGCLTNLKIDGDLNYEHGNCWHDIFDAISQARKLIYIVGWSVYYNVKLIRDGNDEKSCTLGDLLKTKSQEGVRVLLLVWDDPTSPSVLGYKTDGIMNTHDEDTCRFFKHSSVRVLLCPRTGGKGHSWIKKPEAGTIYTHHQKTVIVDADAGQNKRKIIAFVGGLDLCMGRYDTPHHSLFRTLHTAHKEDYHNPNFTGPVDGCPREPWHDLHSQIDGPAAYDILTNFEERWLRASKVSGLRKMKSSYDDSLLNISRIPDIIGIADVPSLDKDKPDNWHVQIFRSIDSNSVIGFPKEPKDAIKRNLVCGKNVLIDMSIHAAYVKAIRAAQKFIYIENQYFLGSSYNWDNYKNLGANNLIPMEIALKIANKIKQNERFAVYIIIPMWPEGVPTSTPTQRILFWQFKTMEMMYETIYKALQEAGLDNQYEPQDYLNFFCLGNRETPDNGNDLNAKDPTGANTPQALTQKNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWATKHSRPCGQVYGYRMSLWDEHIGGLEECFKQPESLECVRRIRSLSELNWKEYAANDHLTEMKGHLLKYPLQVDSNGKVKPLAGHETFPDLGGNIKGTFTGIQENLTI 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02061 854 Gene3D Endonuclease Chain A 233 480 - -
Bva11g02061 854 PANTHER PHOSPHOLIPASE D 7 854 IPR015679 -
Bva11g02061 854 Gene3D Endonuclease Chain A 511 750 - -
Bva11g02061 854 CDD C2_plant_PLD 36 187 - -
Bva11g02061 854 Gene3D C2 domain 35 175 IPR035892 -
Bva11g02061 854 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 7 854 - -
Bva11g02061 854 Pfam C2 domain 40 166 IPR000008 -
Bva11g02061 854 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Bva11g02061 854 Pfam Phospholipase D Active site motif 700 726 IPR001736 GO:0003824
Bva11g02061 854 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824
Bva11g02061 854 ProSiteProfiles C2 domain profile. 21 164 IPR000008 -
Bva11g02061 854 SMART C2_3c 41 163 IPR000008 -
Bva11g02061 854 SUPERFAMILY Phospholipase D/nuclease 546 784 - -
Bva11g02061 854 SUPERFAMILY Phospholipase D/nuclease 212 466 - -
Bva11g02061 854 SMART pld_4 699 726 IPR001736 GO:0003824
Bva11g02061 854 SMART pld_4 365 400 IPR001736 GO:0003824
Bva11g02061 854 PIRSF PLD_plant 27 854 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva11g02061 854 Pfam Phospholipase D C terminal 773 844 IPR024632 -
Bva11g02061 854 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Bva11g02061 854 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02061 Bva-Chr11 17267114 17275475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02061 32 854 Phospholipase D Gene Family (Wang group) AT2G42010 69.494 0.0 1275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02061 K01115 - gmx:100786241 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02061 11 17267114 17275475 Bva11g02061 11 17267114 17275475 ECH