Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02044 ATGAGAAGACtccgtcaattccttctttctcatGCTCTGCTCTGCtctattctttgttttatttcgtTCATCACAGTCTCGCCAGCGACTGAAAAGGAGATTTTGCTACAATTTAAGGGTAACATTACAGATGATCCCTACAACAGTTTGCGTTCGTGGACCTTAAGTGGAAACCCTTGTGAAGATTACGACGGTGTTTCCTGTAACTCGGAAGGATTTGTGGAAAGGATTGTTCTATGGAACACTAGCTTGGCCGGAGTATTGTCTCCAGCTCTATCGGGGTTAAAATCGTTGAGGATTTTGACATTGTTCGGGAATCGCTTTTCGGGTCATATCCCTCTAGAATATTCTGACATACACACGTTGTGGAAGATCAATTTGAGTACCAATGCGTTATCTGGTTCAATTCCAGACTTCATTGGTGATTTACCGAGCATCCGCTTTCTGGATTTGTCAAGGAATGGCTTCGCCGGGGAGATACCATCGGCTTTGTTTAGGTACTGTTACAAAACCAAGTTCGTTGCTTTCTCTCATAACAGTCTTTCAGGTTCCATTCCAGCGTCGTTGGTGAATTGCTCCAACCTTGaaggttttgatttttctttcaacaatcTTAGTGGGGGTATTCCTTCTCGAATTTGTGACATCCCAAGCTTATCCTTCATAATCTTGAGAAGCAATGGCTTATCAGGAAGTGTGCAAGAGCAGATTTCTTCTTGCCAAAGTTTAAAACATCTGGATCTTGGCAGTAATATGTTTACTGGTTTGGCCCCGTTCAACACCCTTGGAATGCAAAATCTTACTTATTTCAATGTATCTTATAATGGGTTTAGTGGTCAGATTCCTGAGACGGCAACCTGTAGTGAGACATTACAAGTTTTTGATGCTTCAGGGAATGATTTGGATGGGGAGATCCCCTTGAGCTTaacaaaatgcaaaaacaTAAAGCTATTGGCTTTGGAGTTAAATAGGCTGCACGGGAGTATTCCGGAAAGCATTCAGGATTTGGAAAGGTTATTAGTTATTAAACTGGGTAATAATTCTATAGGTGGGTTCATTCCAGAGGGGTTTGGCAACATTGAGCTCCTTGAAGTTCTAGATTTGCACAATCTAAACCTCATTGGTGAAATTCCCATCAACATAAGCAATTGCAGGTTTCTTCTTGAGCTGGATATTTCTGGTAATAACTTAGAGGGAGAAATTCCTCAGACCCTTTACAACATGACGAATCTGAAAGTCCTTGACCTTCATCAAAACCAGCTTAATGGAAGCATCCCAGCAAACCTAGGAAACCTGTCAAAGCTCCAATCCCTAGATTTATCACATAATTCGCTCTCTGGTTCAATCCCTTCTTCACTTGGAGATTTGAAAAACTTGATACATTTTAATCTGTCGTTTAACAATCTCTCAGGTCCGATTCCCCTTCTTCCAACCATCCAGAGTTTTGGTTCGTCTGCATTTTCAAATAATCCGTTTCTTTGCGGGGCTCCTTTGGACACACCTTGCTCAGCAAATGGCACTAGATCACATACAGTTCCTGGTAAAACGAAAGTGCTTAGTGTCTCTGCAATTGTTGCAATTGTTGCTGCAGCTGTAATTCTTGCTGGGGTTTGTTTGGTGACCATCATGAACATTAAGGCTCGTAGTAGGAAAAAAGATGACCAGTCAATGATTATTGAGAGCACACCTCTTGGGTCAACGGAATCAAATGTGATTATCGGGAAGTTGGTTCTTTTCAGCAAAAGTTTACCGTCAAAGTATGAAGATTGGGAGGCAGGAAAGAAAGCATTGCTTGATAAAGAGTCTCTGATAGGCGGTGGATCAATTGGTACAGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTCGAGACTTTGGGAAGGATCAGAAACCAGGATGAATTTGAGCACGAAATTGGGCGACTGGGCAATCTTCAACACCCTAATTTAGTTGCCTTTCAAGGTTATTATTGGTCATCGACGATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGgaaatttatatgataatcTACATGGGATAGGTTATCCAGGAACCAGCACTAGTAGTGGTAATAAGGAGTTATATTGGTCTAGAAGGTTCCAAATTGCAGTTGGAACCGCAAGAGCCCTTGCTTATCTTCACCATGATTGTCGACCTCCAATTCTCCATCTCAACATTAAATCATCTAACATACTTTTAGATGAAAATTACGATGCTAAGTTGTCAGATTATGGATTAGGAAAATTACTGCCTATTTTGGACAATTATGGCCTGACCAAATTCCACAATGCTGTCGGGTATGTTGCACCAGAGTTGGCTCAAAGTCTGAGGCAGAGTGAGAAAtgtgatgtttatagttttgggGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAACCTGTGGAGAGTCCAACAACAAACGAGGTGGTGGTCTTGTGTGAATATGTTAGAGGGCTGTTGGAGACTGGCTCTGCTTCAGATTGCTTTGATAGAAGTTTGCTGGGTTTTGCGGAGAACGAATTGATTCAGGTTATGAGATTGGGACTAATTTGTACTTCAGAGGATCCTTCAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTGGAGTCTATCAGAAATGGATTCGAATCGCATAATCAGTA 2666 0.4025 MRRLRQFLLSHALLCSILCFISFITVSPATEKEILLQFKGNITDDPYNSLRSWTLSGNPCEDYDGVSCNSEGFVERIVLWNTSLAGVLSPALSGLKSLRILTLFGNRFSGHIPLEYSDIHTLWKINLSTNALSGSIPDFIGDLPSIRFLDLSRNGFAGEIPSALFRYCYKTKFVAFSHNSLSGSIPASLVNCSNLEGFDFSFNNLSGGIPSRICDIPSLSFIILRSNGLSGSVQEQISSCQSLKHLDLGSNMFTGLAPFNTLGMQNLTYFNVSYNGFSGQIPETATCSETLQVFDASGNDLDGEIPLSLTKCKNIKLLALELNRLHGSIPESIQDLERLLVIKLGNNSIGGFIPEGFGNIELLEVLDLHNLNLIGEIPINISNCRFLLELDISGNNLEGEIPQTLYNMTNLKVLDLHQNQLNGSIPANLGNLSKLQSLDLSHNSLSGSIPSSLGDLKNLIHFNLSFNNLSGPIPLLPTIQSFGSSAFSNNPFLCGAPLDTPCSANGTRSHTVPGKTKVLSVSAIVAIVAAAVILAGVCLVTIMNIKARSRKKDDQSMIIESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGKKALLDKESLIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEHEIGRLGNLQHPNLVAFQGYYWSSTMQLILSEFVPNGNLYDNLHGIGYPGTSTSSGNKELYWSRRFQIAVGTARALAYLHHDCRPPILHLNIKSSNILLDENYDAKLSDYGLGKLLPILDNYGLTKFHNAVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLETGSASDCFDRSLLGFAENELIQVMRLGLICTSEDPSRRPSMAEVVQVLESIRNGFESHNQ 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02044 888 SUPERFAMILY L domain-like 49 163 - -
Bva11g02044 888 ProSiteProfiles Leucine-rich repeat profile. 242 263 IPR001611 GO:0005515
Bva11g02044 888 SMART LRR_typ_2 408 431 IPR003591 -
Bva11g02044 888 SMART LRR_typ_2 143 167 IPR003591 -
Bva11g02044 888 SMART LRR_typ_2 336 359 IPR003591 -
Bva11g02044 888 SMART LRR_typ_2 432 456 IPR003591 -
Bva11g02044 888 PRINTS Leucine-rich repeat signature 387 400 - -
Bva11g02044 888 PRINTS Leucine-rich repeat signature 432 445 - -
Bva11g02044 888 PANTHER - 12 885 - -
Bva11g02044 888 PANTHER UNNAMED PRODUCT 12 885 - -
Bva11g02044 888 ProSiteProfiles Leucine-rich repeat profile. 410 433 IPR001611 GO:0005515
Bva11g02044 888 ProSiteProfiles Leucine-rich repeat profile. 434 457 IPR001611 GO:0005515
Bva11g02044 888 CDD STKc_IRAK 604 879 - -
Bva11g02044 888 ProSiteProfiles Protein kinase domain profile. 598 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02044 888 Gene3D Ribonuclease Inhibitor 30 143 IPR032675 -
Bva11g02044 888 Gene3D Ribonuclease Inhibitor 144 216 IPR032675 -
Bva11g02044 888 Pfam Protein kinase domain 600 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02044 888 Gene3D Phosphorylase Kinase; domain 1 598 678 - -
Bva11g02044 888 Gene3D Transferase(Phosphotransferase) domain 1 679 888 - -
Bva11g02044 888 Pfam Leucine rich repeat 389 445 IPR001611 GO:0005515
Bva11g02044 888 SUPERFAMILY Protein kinase-like (PK-like) 600 877 IPR011009 -
Bva11g02044 888 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bva11g02044 888 SUPERFAMILY L domain-like 165 494 - -
Bva11g02044 888 Gene3D Ribonuclease Inhibitor 217 511 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02044 Bva-Chr11 17202796 17206559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02044 7 885 Receptor kinase-like Gene Family AT1G62950 64.916 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bva11g02044 Pkinase 2.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02044 - - gmx:100800970 1443.71