Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02038 ATGGATCCAATTACAGCACATGGGCATTCTCATTCTCTTCCCTCTCCTTTCCACACAAGAGATCTCCATCTACACCATCAGCCTCAGCAGCAATTTCACTCTCTTCAACAGCAAAACATAGAAGAGGAGCAAAGTGGAAGCGGCAGTGGACTCAACCTTGTTCATAAAAGGGAACGTGAAGACGACGACAACAAAAATCACAGTCATGAAGGCGAAGATGGCGGCGGAGGGCGTTCCGGTGAAGGTACTGAAATGACAAGAAGACCAAGAGGGAGACCCAATGGATCCAAGAACAAAGCAAAGCCACCCATTATCATAACACGTGACAGCGCCAATGCCCTTAGAACCCATATGATGGAGGTGGGTGATGGGTGTGACGTCCTAGAGAGTGTCTCCAACTTTGCAAGGCGCCGCCAAAGAGGGGTGTGCATTATGAATGGCACTGGCACCGTCACCAATGTAACTCTCAGGCAGCCAGCCTCGTCTGGTGCCGTCGTCTCCCTTCATGGAAGGTTCGAGATCTTGTCACTAGCTGGTTCATTCTTACCACCACCGTTTCCGCCGGCTGCCTCCGGTTTGACCATATACTTGGCCGGTGGACAAGGCCAGGTGGTTGGGGGAAATGTTGTTGGGACACTCATCGCTTCTGGGCCGGTGATCATCATGGCTGCTACCTTTAGCAACGCTGCTTATGAAAGGCTTCCATTGGAAGAAGACGACCCCTCAATGTCACTGCAAGGAGGTTCAATTGGGTCTCCGGGAGGAGGAGGTGGTGGTGGTCAACAGCAACAATTATTAGGGGATGGCGCAACTGCTCCTCTTTTCCATGGTCTGGCTCCTAATCTTGTCAATTCTATTCAGATGCCATCAGAGGCATTCTGGTCCACTGGTCGACCTCCATTCTA 905 0.5127 MDPITAHGHSHSLPSPFHTRDLHLHHQPQQQFHSLQQQNIEEEQSGSGSGLNLVHKREREDDDNKNHSHEGEDGGGGRSGEGTEMTRRPRGRPNGSKNKAKPPIIITRDSANALRTHMMEVGDGCDVLESVSNFARRRQRGVCIMNGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPFPPAASGLTIYLAGGQGQVVGGNVVGTLIASGPVIIMAATFSNAAYERLPLEEDDPSMSLQGGSIGSPGGGGGGGQQQQLLGDGATAPLFHGLAPNLVNSIQMPSEAFWSTGRPPF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02038 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 240 - -
Bva11g02038 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 4 301 - -
Bva11g02038 301 MobiDBLite consensus disorder prediction 28 51 - -
Bva11g02038 301 CDD DUF296 115 177 IPR005175 -
Bva11g02038 301 Gene3D - 114 243 - -
Bva11g02038 301 ProSiteProfiles PPC domain profile profile. 111 248 IPR005175 -
Bva11g02038 301 MobiDBLite consensus disorder prediction 240 266 - -
Bva11g02038 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 228 IPR005175 -
Bva11g02038 301 MobiDBLite consensus disorder prediction 1 103 - -
Bva11g02038 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 301 IPR014476 GO:0003680
Bva11g02038 301 MobiDBLite consensus disorder prediction 53 91 - -
Bva11g02038 301 PIRSF ESCAROLA 18 300 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02038 Bva-Chr11 17177021 17177926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02038 1 301 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 57.751 1.21e-84 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02038 - - pop:7465813 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02038 11 17177021 17177926 Bva11g02038 11 17177021 17177926 ECH