Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02034 ATGGAGACAAGGGACGACGTTAGTAGTGGGGTCACAGTGGTGGAATCAGATGCTCCGAGGACTGAAAACCCAGCTCCGGCTGGTGGATCACCAACGCCGGCGCCGGCGGCACAAGTGAGTGTTGCCCCACCACAGCCAGCTCCGATGGCAGCAGCGCCGGTGGCCACGACCATGCCgttgaaaaaaaagaggggTCGGCCCAGAAAGTATGGACCAGACGGGTCAGTGACCAAGGCGCTATCTCCCAAGCCAATATCTTCAGCTCCACCGTCGGTAATCGATTTCTCGGCGGAGAAGCGGGGAAAAGTGCGGCCCGCTAGCTCGGTGAGCAAAGCCAAATTCGAGGTCGAGAATTTAgGTGAATGGGTCGCATGCTCTGTTGGTACTTTTACACCCCACATCATCACTGTTAATTCAGGGGAGGATGTCACTATGAAGATAATATCGTTTTCCCAACAAGGGCCTCGAGCTATATGCATTCTTTCTGCAAATGGCGTGATATCTAGTGTCACACTTCGTCAGCCTGATTCTTCTGGGGGCACAATGACGTACGAGGGACGGTTCGAAATTCTGTCCTTGTCTGGTTCATTCATGCCAAACGAAAGCGGCGAGACGCGAAGCAGATCTGGTGGGATGAGTGTTTCTTTAGCAAGTCCAGATGGGCGTGTTGTGGGTGGTGGAGTAGCTGGTCTCTTAGTAGCTGCAAGTCCTGTGCAAGTAGTCGTAGGCAGTTTTCTGGCAGGAAACCAACATGAGCAGAAGacaaagaaacagaaagatgAAATAGTAATGAGTGGCAGACCAACTACGGCCGTTCCTCTTTCTAGTGCTGAACCAATAATACACAATCTGTCATCTTCATATTCCTTCCGAGGAGATAATTGGTCTGCCATGCCAACTCCAGCAGATACAAGGAATCAGCCAACTGACATTAATGGGTCACAGTCTGGAGGGTG 956 0.5 METRDDVSSGVTVVESDAPRTENPAPAGGSPTPAPAAQVSVAPPQPAPMAAAPVATTMPLKKKRGRPRKYGPDGSVTKALSPKPISSAPPSVIDFSAEKRGKVRPASSVSKAKFEVENLGEWVACSVGTFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTMTYEGRFEILSLSGSFMPNESGETRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKTKKQKDEIVMSGRPTTAVPLSSAEPIIHNLSSSYSFRGDNWSAMPTPADTRNQPTDINGSQSGG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02034 318 MobiDBLite consensus disorder prediction 291 318 - -
Bva11g02034 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 245 IPR005175 -
Bva11g02034 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 312 IPR039605 GO:0003680
Bva11g02034 318 Gene3D - 132 265 - -
Bva11g02034 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 248 - -
Bva11g02034 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 312 - -
Bva11g02034 318 ProSiteProfiles PPC domain profile profile. 127 269 IPR005175 -
Bva11g02034 318 MobiDBLite consensus disorder prediction 26 50 - -
Bva11g02034 318 MobiDBLite consensus disorder prediction 1 92 - -
Bva11g02034 318 CDD DUF296 131 222 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02034 Bva-Chr11 17147270 17151052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02034 60 312 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 70.632 2.26e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02034 - - zju:107406129 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02034 11 17147270 17151052 Bva11g02034 11 17147270 17151052 ECH