Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02021 ATGAAATTCCTCGGTTTcctgttttctctctttctggtTGTGGCATTTCCTAGTCTGCAACCAGTTTGCGGAAATGCGGAGCTTGGAGCTCTGATGAACTTAAAGTCCTCTCTGGACCCAGAGGGAAAAGTGTTGACCTCGTGGACCAGTGACGGTGATCCGTGTAGTAATGGTTCGTTCGAAGGAGTAGCCTGCAACGAGGACGGGAGAGTGGTAAACATTACTTTACCGGGGAAGGGCCTTTCGGGCTCGGTCTCTCCGGCGATGGCAGAGCTCAAATGCTTATCGGGTCTATATCTTCATTACAACCATCTCTCTGGAGAGATACCCAGAGAGATTTCAAATCTCACTCAACTGGTCTATCTCTATCTTGATGAGAATTATCTTTCTGGAAGCATTCCTTCTGAGGTCGGCCACATGGCTAGTCTCCAAGACCTGCAGTTATGTTGTAACAAACTGGTGGGGAGTATACCTACACAGATAGGTTCCTTGAAGCAGCTTAGTTCTCTCTCTTTGCAATCTAATAAACTATCTGGTTCAATTCCTCCAAGCTTGGGGACCTTGCGGAATCTAAGGAGGCTAGATTTGAGCTTCAACAACTTCAGTGGAAGAATACCTGCAACACTAGCTGATATTCCAAATTTGGAAGTTGTACATGTTCAGAACAACTCTCTTTCAGGAGTTGTTCCTTCTGCATTGAGGAACTTGAAGGAAGGATTCAAAAGTGCAAATAACCCAGGCTTATGTGGAGTTGGGTTTTCTACTCTGAGGGATTGTACCGCAtatgaaaatgtaaatattaataatcatgAAAGGAATTTGCCGGAGCCTGCAATTCTCCAGTTGCATTGTAACCAGACCGATTGTTCAAAATCTAGAAGATTTCCTCGAACTATAATAGCAGCTGGAGTTATAACTACCACTATTACATTACTGGGCGCTGGCTTTTTGACTTTCGCCAGATACCGGCGTCGGGAACAGAAGAATAGGGTTGCAAATACATCAGATTCTTCAGAAGGCCATCTTAGCCCTGATCAGCCTAGAGAATTCTACACGATAACTCCGTCTCCACTTGTTAATCTTGATTATTCTAATGGATGGGATACATTGGCAGATGGTCAAAATCGCGCTGGATCATCTCATGAATATATCAACACTTTCAGGTTCAATATGGATGAGGTTGAATCTGCAACACAGTACCTTTCCGAGGCCAATTTATTAGGTAAGAGCAAGTTCTCAGCGGTCTACAAGGGAATTCTCAGAGACGCTTCTCCTGTGGCTATTAGAAGCATTACTGAGACTTGCTGTAAAACCGAGGAAGCTGAATTTATAAACGGGTTAAACTTGTTAACTTCATTGAGACACGGAAACCTCGTTAAACTTAGAGGTTTCTGTTGCTCAAGGAGCAGAGGTGAATGTTTCCTAATCTATGACTTTGCTCCCAACGGTAACCTGTCTCAATATCTTGACGTGGAAGATGGAAGTGACTGTGCAATTGATTGGACCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAAGGTATTGAATATCTTCATAGCGATGAAGCAAACAAACCTGCGATAGTTCACCAAAATCTTTCTGTTGAAAAGATTGTCCTTGACCATCAGTTTAACCCATTGATTATGGATGCTGGCCTTCCTAAGCTTCTCGCAGATGACGTGGTTTTCTCAGCTCTAAAAGTAAGTGCTGCCATGGGATACCTAGCACCCGAGTATATCACTACTGGCCGCTTTACCGAGAAGATTGACATTTATGCATTTGGGGTTATCCTTCTTCAAGTTCTATCTGGGAAGAAAACAATTGGTGGTTCAATCAGGGTGGCACTTGAGTCGTTTAGATCTGAAGATTTTGTTGATTCAAATCTCAAGGGAAGATATTCTAAATCTGAAGCAGAAGCTCTTGCAAAGCTTGCAATGCTGTGCACCCATGAGCATCCTGATCATAGGCCAACCATGAAGGAGGTGATTCAGGAACTGCACGAGCTTCCTGCTGATTCATG 2021 0.4275 MKFLGFLFSLFLVVAFPSLQPVCGNAELGALMNLKSSLDPEGKVLTSWTSDGDPCSNGSFEGVACNEDGRVVNITLPGKGLSGSVSPAMAELKCLSGLYLHYNHLSGEIPREISNLTQLVYLYLDENYLSGSIPSEVGHMASLQDLQLCCNKLVGSIPTQIGSLKQLSSLSLQSNKLSGSIPPSLGTLRNLRRLDLSFNNFSGRIPATLADIPNLEVVHVQNNSLSGVVPSALRNLKEGFKSANNPGLCGVGFSTLRDCTAYENVNINNHERNLPEPAILQLHCNQTDCSKSRRFPRTIIAAGVITTTITLLGAGFLTFARYRRREQKNRVANTSDSSEGHLSPDQPREFYTITPSPLVNLDYSNGWDTLADGQNRAGSSHEYINTFRFNMDEVESATQYLSEANLLGKSKFSAVYKGILRDASPVAIRSITETCCKTEEAEFINGLNLLTSLRHGNLVKLRGFCCSRSRGECFLIYDFAPNGNLSQYLDVEDGSDCAIDWTKRVSIIKGIAKGIEYLHSDEANKPAIVHQNLSVEKIVLDHQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKIDIYAFGVILLQVLSGKKTIGGSIRVALESFRSEDFVDSNLKGRYSKSEAEALAKLAMLCTHEHPDHRPTMKEVIQELHELPADS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02021 673 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Bva11g02021 673 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 669 - -
Bva11g02021 673 SMART LRR_typ_2 164 186 IPR003591 -
Bva11g02021 673 SMART LRR_typ_2 188 211 IPR003591 -
Bva11g02021 673 SMART LRR_typ_2 212 235 IPR003591 -
Bva11g02021 673 SMART LRR_typ_2 92 115 IPR003591 -
Bva11g02021 673 SMART LRR_typ_2 116 140 IPR003591 -
Bva11g02021 673 Pfam Protein tyrosine and serine/threonine kinase 405 666 IPR001245 GO:0004672|GO:0006468
Bva11g02021 673 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Bva11g02021 673 Gene3D Ribonuclease Inhibitor 142 261 IPR032675 -
Bva11g02021 673 Gene3D Transferase(Phosphotransferase) domain 1 480 673 - -
Bva11g02021 673 Gene3D Phosphorylase Kinase; domain 1 369 479 - -
Bva11g02021 673 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 669 - -
Bva11g02021 673 ProSiteProfiles Protein kinase domain profile. 401 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g02021 673 SUPERFAMILY Protein kinase-like (PK-like) 379 667 IPR011009 -
Bva11g02021 673 Gene3D Ribonuclease Inhibitor 26 141 IPR032675 -
Bva11g02021 673 MobiDBLite consensus disorder prediction 328 349 - -
Bva11g02021 673 SUPERFAMILY L domain-like 23 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02021 Bva-Chr11 17084785 17086945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02021 4 514 Miscellaneous Gene Families AT4G22730 56.929 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bva11g02021 PK_Tyr_Ser-Thr 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02021 - - gmx:100777169 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02021 11 17084785 17086945 Bva11g02021 11 17084785 17086945 ECH