Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02013 ATGGGGAGGCAACCCTGCTGTGACAAGCTTGGGGTGAAGAAAGGTCCATGGACTTCTGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACTAATGGCCAGTGCTGTTGGCGAGCTGTACCCAAGCTTGCTGGACTCCGCCGCTGTGGCAAGAGTTGCCGCCTTCGTTGGACTAATTATCTTCGCCCTGACTTAAAGAGAGGTCTCCTCACAGAAGCAGAAGAGCAACTCGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCTAGATTACCAGGAAGGACAGACAACGAGATTAAAAATCATTGGAACACTCACATCAAGAAGAAGCTAATAAAGATGGGCATAGATCCCGTTACTCACGAGCCCCTCAATAAAACAGAAGCATCATCCTCTGCTGAGCATTTGCCACAATCTGGCAATAATAATCAGGGTAAGGAAACTGACGGGGTTGTCAACTCGGAGGAGAATTCAAGCTCATCCCCAGCGGAGAATTCTTCTGGGGACGAATCCCTTTTCCTAGATTGCATTTGCAGCGATGACTCCCTGATGAATAGCTTGTGGCTGGATGAAACCCCTTTGGTAGAAGCATTATGGGACAGCACACCTAAAGTAGAGAACAACAGCAACGACATGGGTGGCTTGCCATCTTGGGAGGATAATTGTGCTTGGTTATTGGACTGTCAAGACTTTGGCATTCACgattttggttttaattatttcaatgaGATTGAGTCAAATGCACTGCAAAGTCTAGGAATGGAAGGAAAGGGGCATTA 794 0.4622 MGRQPCCDKLGVKKGPWTSEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPLNKTEASSSAEHLPQSGNNNQGKETDGVVNSEENSSSSPAENSSGDESLFLDCICSDDSLMNSLWLDETPLVEALWDSTPKVENNSNDMGGLPSWEDNCAWLLDCQDFGIHDFGFNYFNEIESNALQSLGMEGKGH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02013 264 Gene3D - 12 67 - -
Bva11g02013 264 PANTHER PROTEIN ODORANT1-LIKE 2 249 - -
Bva11g02013 264 MobiDBLite consensus disorder prediction 126 173 - -
Bva11g02013 264 SMART sant 66 114 IPR001005 -
Bva11g02013 264 SMART sant 13 63 IPR001005 -
Bva11g02013 264 CDD SANT 16 61 IPR001005 -
Bva11g02013 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva11g02013 264 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva11g02013 264 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Bva11g02013 264 Gene3D - 71 152 - -
Bva11g02013 264 MobiDBLite consensus disorder prediction 129 173 - -
Bva11g02013 264 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva11g02013 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 249 - -
Bva11g02013 264 CDD SANT 71 112 IPR001005 -
Bva11g02013 264 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva11g02013 264 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva11g02013 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02013 Bva-Chr11 17053083 17054913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02013 1 243 MYB Transcription Factor Family AT4G22680 60.902 2.38e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g02013 Myb_DNA-binding 5.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02013 K09422 - gmx:100786965 463.381