Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02009 ATGAATACGTTTTCACATGTTCCTCCAGGCTTCCGGTTCCATCCCACTGATGAAGAACTTGTTGATTACCACCTTAGGAAAAAGGTAGCTTGTAAAAGGATCGATCTAGATGTTATCAAAGATGTCGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAATTATGCAGAATTGGCACTGGAGAACAAAACGATTGGTATTTCTTTAGCCATAAAGATAAGAAGTACCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACCGGAAGAGACAAGGCGATCTACGCTAAGCATTTCCTTATTGGCATGAGAAAGACATTGGTGTTTTACAAAGGACGAGCTCCAAATGGACAAAAATCTGACTGGATTATGCATGAATATCGGCtcgaaacaaatgaaaatgtaaCTCCTCAGGAAGAAGGCTGGGTTGTATGTAGAGTGTTCAAGAAGCGCATGACAACAGTTCGGAAAATGGGAGAGTATGAGTCACCATGTTGGTATGATGACCAAGTTTCCTTAATGCAAGATCTTGAATCCCCAGTGCGAATTTCTAACCCTTATGCATCATATCACCAACACTACCCCTGCAAGCAGGAGCTGGAGTTCCAATACAACATACCCCATGATGCTTTCCTCCAACTTCCTCAGCTAGAAAGCCCTAAAGTTCCTCAATCAACAAGTCTGAGTTGCAACTCAGTTGTCCCTTATGGGTATGATGGGAATGCCAATGGCAGCGCCCTGCAGTCCTCATCACTCACGCAAGAAGAACGCACACAGGATTGCCATCAACAAAGCCTGAAACCTCTTCATGGTAGCATTGATCAGGCAGTGGATCAGGTGACTGATTGGCGCGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCATGACCAAGATGCTTCCAAGGAAAACAGTTATTCTTCCAATGCAGCTGTCCTCCATGCAGATCAGCAAATTGCTATTCTTGCAAATGAATCCAAAAGGCCTGAAGAATATGCCTCAACTTCCACCTCCAGTTGCCAAATTGACCTATGGAAGTG 1058 0.431 MNTFSHVPPGFRFHPTDEELVDYHLRKKVACKRIDLDVIKDVDLYKIEPWDLQELCRIGTGEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYAKHFLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENVTPQEEGWVVCRVFKKRMTTVRKMGEYESPCWYDDQVSLMQDLESPVRISNPYASYHQHYPCKQELEFQYNIPHDAFLQLPQLESPKVPQSTSLSCNSVVPYGYDGNANGSALQSSSLTQEERTQDCHQQSLKPLHGSIDQAVDQVTDWRVLDKFVASQLSHDQDASKENSYSSNAAVLHADQQIAILANESKRPEEYASTSTSSCQIDLWK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02009 352 MobiDBLite consensus disorder prediction 335 352 - -
Bva11g02009 352 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Bva11g02009 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 337 - -
Bva11g02009 352 MobiDBLite consensus disorder prediction 331 352 - -
Bva11g02009 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 337 - -
Bva11g02009 352 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Bva11g02009 352 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Bva11g02009 352 MobiDBLite consensus disorder prediction 251 271 - -
Bva11g02009 352 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02009 Bva-Chr11 17027465 17031400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02009 1 352 NAC Transcription Factor Family AT1G12260 55.699 6.37e-138 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g02009 NAM 2.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02009 - - tcc:18606319 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00289 08 1398719 1402690 Bva11g02009 11 17027465 17031400 BWGD
Bva11g02009 11 17027465 17031400 Bva11g02009 11 17027465 17031400 ECH