Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02008 ATGTCATCCTCTTCTACTGCCTTATCGCTGGACCACCTCACCCCTTCCGAGCAGCTTTGTTATGTCCACTGCAACATCTGTGACACCGTGCTCGCTGTAAGCGTTCCTTGCACAAGCCTGTTCAAAACCGTGACTGTCCGATGCGGCCATTGCACCAATCTTCTGCCAGTGAACATGCGTGGATTGCTTCTGCCATCGTCTAATCAATTTCACTTGGGTCACTCTTTATTCTCTCCGTCCCATAACCATCTGGAGGAGATGCCAAATCCATCCCCGAATTTCTTGATCAACCAGACCAACTCTTTAAATGACTTCTCTATGCCTGCCAGGACTGCAGCTGATGAGCTTCCACGGCCACCGGTCATAAATAGACCTCCTGAGAAGAGACAAAGAGTTCCCTCCGCGTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTCTGTGAATCCCGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACAGTGAAGAAGACGAATGTGCGCCAGCAGGAAGGAGAGGATGTTCTGAGGAAAGATGGGTTTTTTGCTTCGGCTAATGTTGGTGTTTCTCCctacta 641 0.4961 MSSSSTALSLDHLTPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSSNQFHLGHSLFSPSHNHLEEMPNPSPNFLINQTNSLNDFSMPARTAADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVRQQEGEDVLRKDGFFASANVGVSPY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02008 213 Gene3D High mobility group box domain 122 187 IPR036910 -
Bva11g02008 213 PANTHER PROTEIN YABBY 6-RELATED 1 211 IPR006780 GO:0007275
Bva11g02008 213 SUPERFAMILY HMG-box 121 170 IPR036910 -
Bva11g02008 213 Pfam YABBY protein 15 177 IPR006780 GO:0007275
Bva11g02008 213 PANTHER PROTEIN YABBY 4 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02008 Bva-Chr11 17016313 17018736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02008 26 211 C2C2-YABBY Transcription Factor Family AT4G00180 58.373 1.33e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva11g02008 YABBY 2.6e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02008 K25796 - gmx:100798441 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02008 11 17016313 17018736 Bva11g02008 11 17016313 17018736 ECH