Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02005 ATGGAATCCGCTCATGGTTCCCCTGTTCTCACTGACCCTGTTCCCATCAGCAAGTCCAGACTTGGAATTCATTCTAGTCTCTTAACTTTCTCCCAGCTAGATCAACCAATGTCTCCCACTACCAGTAAGTATACAAGAAGCGGTTCCAGGAAAAGCACAGCTAGTCTCGATGATGTTCGCTTCAATGGATGGTTGGATGCCATGAAGGCTTCCTCGCCCCCAAGGAAGAAGCTTCTTAAAGGTTCTTGCATTCAGGTTGCTTCCATTGACAATGAAATTGAAGATAATATTTCTTGGATGCAGCTTAATTATCCATCAGCACTGGACTgctttgacaaaattattgagcatgccaaaaataagaagattGCAATGTTTCTAGACTACGATGGCACTCTCTCACCCATTGTAGACGATCCAGATTGTGCCTTCATGTCCGAAGCTATGCGAGCAACGGTGAGAAGTGTGGCAAAGTATTTTCCCACGGCAATCATTAGCGGAAGAAGCCGGGACAAGGTTTATGATTTAGTTAAACTAACGGAACTGTACTATGCTGGAAGTCATGGTATGGACATTATTGGCCCTGACAGTGATTCTCTTTCTAAAGTCCATCCTGATTATGTTAAATCCACTGATAATCAGGGAAAGGAAATAACACTGTTTCAACCTGCAAGAGAATTTCTCTCCATGATCGACCAGGTTTTTAAAACCCTGGTCGAGATTACCAAAGATATCAAAGGCGCAAAAGTTGAAAATCACAAGTTTTGCGTATCTGTACATTACCGTAATGTAGAAGAGAATAATTGGAAAACTATTGGACAGCGCGTCCATGACGTGGTAAAAGATTGCCCTCGTTTACGTTTAACTCACGGACGGAAGGTTTTAGAAATCCGTCCCGTGATTGATTGGAATAAAGGAAAAGCAGTTGAGTTCTTACTTGAATCTCTAGGGTTAACTGACAGGGATAATGTGCTTTCCATCTACATTGGGGATGACAAGACTGACGAAGATGCATTCAAGGTGCTGCGTGATAGCAAGCGAGGTTTTGGgattttggtttcttcaaTAAGGAAAGAAAGTAACGCCTTCTACTCTCTTCACGACCCAAAAGAGGTCATGAAATTTCTACAACTCTTAGTGAATTGGAAGAGGCAACAAGGCAGGAAGcaattgatttg 1178 0.4049 MESAHGSPVLTDPVPISKSRLGIHSSLLTFSQLDQPMSPTTSKYTRSGSRKSTASLDDVRFNGWLDAMKASSPPRKKLLKGSCIQVASIDNEIEDNISWMLNYPSALDCFDKIIEHAKNKKIAMFLDYDGTLSPIVDDPDCAFMSEAMRATVRSVAKYFPTAIISGRSRDKVYDLVKLTELYYAGSHGMDIIGPDSDSLSKVHPDYVKSTDNQGKEITLFQPAREFLSMIDQVFKTLVEITKDIKGAKVENHKFCVSVHYRNVEENNWKTIGQRVHDVVKDCPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDRDNVLSIYIGDDKTDEDAFKVLRDSKRGFGILVSSIRKESNAFYSLHDPKEVMKFLQLLVNWKRQQGRKQLI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02005 391 Pfam Trehalose-phosphatase 125 368 IPR003337 GO:0003824|GO:0005992
Bva11g02005 391 CDD HAD_TPP 123 373 - -
Bva11g02005 391 Gene3D - 122 212 IPR023214 -
Bva11g02005 391 Gene3D - 220 390 IPR023214 -
Bva11g02005 391 SUPERFAMILY HAD-like 123 383 IPR036412 -
Bva11g02005 391 TIGRFAM T6PP: trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Bva11g02005 391 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 4 387 - -
Bva11g02005 391 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 343 IPR006379 -
Bva11g02005 391 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 4 387 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02005 Bva-Chr11 16992957 16998279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02005 116 378 Trehalose Biosynthesis Gene Families AT1G70290 25.448 2.39e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02005 K01087 - tcc:18606311 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02005 11 16992957 16998279 Bva11g02005 11 16992957 16998279 ECH