Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01985 ATGGAGGAAGATAAAGAAGGACCACCGAATAGAGAACTATATGCTCTCCTGAACTTGTCGCCCCAAGCGTCCGATGAAGAAATCCGAAAAGCGTATCGGCAATGGGCACAAGTCTACCACCCAGACAAATACCAAGCTCCCCATATGAAAGATGCTGCTACTGAAAACTTCCAACGCATACGTGAAGCGTATGAGATTTTGTCCGATCCCAATAAGAGGCAGATATATGACATTTATGGTATGGAAGGTCTGACCTCTGGCATGGAACTTGGTCCAAAGCTGGATAAagcagaagaaataaaagctgAAATGGAGAGGCTACGGCGAAGGAAGGAACTAGAAAAGATATCAGCACATTTTCGATCTTCTGGAACAATTTTGACCAATTTGTCTTTGCCAGACCGACTAGATGGTGATGGCATCTTGAGAGGAATGGCCATGACAAGCGAAGTTCAATCTCAGTTGTCAAAACGTAATGTTGTAGCGATTGGTGGCAATTTAGCAGTTAGCGGAAATGACGGTGGTGGAGCTGCTACTGCTTTGTTTAGGCATCAACTCTCAGAAGTTTCTTCTGTAGAACTTATGGGTTCAACTGGTTTACGGGCACTAATTGGGGTGCAGGCATCTCGTCGGCTATCAATACACTCAACTGCAACAACGGGCCTTGCCGTGTCTTTGAAAGATGgttccttgaatctttcaaaTTCCTGGACTCGCCAACTGTCAGAAACAGCAAGTGGAAATATACAGCTTGCTTTGGGATCACATTCATCTATAGCTGTTGGATGGCTAAAGAAAGATGAGAAAAGGTCTGCCTCTGGAGAAGTGAAGTTTGGCACTGGCACTTTTGAGACAGCAGCTCACTATACgtataaattttcttctaaatctCATGGCCGTATTGCAGGCAGATTTGGGAGTTCTGCCCTTGAAGTTGAAGTTGGTGGTGGGAGGAAGTTATCCAAATTCAGCACCGTGCGCTGGTTGTATTCAATAGGAATTCAGGGTATTTTCTGGAGATTTGAGTTGCGTCGTGGGGGCCAAAAGTTAATCATTCCTATTTTGCTTACCAGGCATTTGAATCCCGTGTTTGCTACTGGAGCGTTGGTTCTTCCAGCATCTCTTTACTTTCTACTGAAGAAATTTGTTGTCAAGCCCTATTATCTTAGAAGGGATAAGCAGAAGACTTCAGAGAATGCTGAGAAAATTTCTGTTCAGGTTCAAGAAGCAAAGGCTGCAGCTGAGAAAGCTCAGCAATTACAGCAAAATGTGgctaataggaaaaaaaataggcAATTAGAAACAGGTGGACTGGTTATTACCAGAGCACTCTACGGAAGTCATGAAGTTTTGGACAAGATAAATGCATCAAGGGAAACAAATCATGAATCAGCTTCAAAAGTCCTGGATGTTACAATACCTTTGAATTTCTTAGTTAGTGATTCTGGCCAACTTAAGCTTCACGAAGGTGTAAAAAAATCAGGCATCATGGGATTTTGTGATCTTTGTCCAGGAAAACCAAAACAGTTGTTAGTAGAGTACACTTACGCCGGCAACCAATACAAGGTAATGGTTGGTGATTATGAAGAGTTAATGATTCCTTCGGGCGGATACAGGATCTG 1622 0.4137 MEEDKEGPPNRELYALLNLSPQASDEEIRKAYRQWAQVYHPDKYQAPHMKDAATENFQRIREAYEILSDPNKRQIYDIYGMEGLTSGMELGPKLDKAEEIKAEMERLRRRKELEKISAHFRSSGTILTNLSLPDRLDGDGILRGMAMTSEVQSQLSKRNVVAIGGNLAVSGNDGGGAATALFRHQLSEVSSVELMGSTGLRALIGVQASRRLSIHSTATTGLAVSLKDGSLNLSNSWTRQLSETASGNIQLALGSHSSIAVGWLKKDEKRSASGEVKFGTGTFETAAHYTYKFSSKSHGRIAGRFGSSALEVEVGGGRKLSKFSTVRWLYSIGIQGIFWRFELRRGGQKLIIPILLTRHLNPVFATGALVLPASLYFLLKKFVVKPYYLRRDKQKTSENAEKISVQVQEAKAAAEKAQQLQQNVANRKKNRQLETGGLVITRALYGSHEVLDKINASRETNHESASKVLDVTIPLNFLVSDSGQLKLHEGVKKSGIMGFCDLCPGKPKQLLVEYTYAGNQYKVMVGDYEELMIPSGGYRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01985 540 Coils Coil 94 117 - -
Bva11g01985 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Bva11g01985 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 536 IPR042162 -
Bva11g01985 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Bva11g01985 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Bva11g01985 540 CDD DnaJ 12 69 IPR001623 -
Bva11g01985 540 Pfam DnaJ domain 13 77 IPR001623 -
Bva11g01985 540 SUPERFAMILY Chaperone J-domain 10 91 IPR036869 -
Bva11g01985 540 Coils Coil 393 430 - -
Bva11g01985 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Bva11g01985 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Bva11g01985 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Bva11g01985 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Bva11g01985 540 SMART dnaj_3 11 72 IPR001623 -
Bva11g01985 540 Gene3D DnaJ domain 5 103 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01985 Bva-Chr11 16886765 16892675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01985 14 79 C2H2 Transcription Factor Family AT1G74250 44.118 5.25e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01985 K09531 - gmx:100817782 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01985 11 16886765 16892675 Bva11g01985 11 16886765 16892675 ECH