Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01981 atggcttattctctctctctctatctacTTTTGGTTTGCATATGCTTATGCTTATTTCATGTACTAACGGTGACATGTACAACATACGGCGATAAGACCCCGAAAGTTGTCTCTTCCTCAAATTCATCCCAGCACCGTCATCACAAATGGGTCGGACCCGTCGGCAACCGCGTAATAACCGTTGATGTTAACGGCGGTGGCCATTTTCGGTCCGTCCAAGCGGCGGTTAATTCAGTTCCAGAGAACAATGGGATGAACGTCCTTATTCAAATTAGTGCAGGCTATTACATAGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTACATAACGTTTCAGGGAGCGGGAAAGGATGTGACGGTGATAGAATGGCATGACCGAGCCAGTGACCCCGGTCCCAATGGACAGCAGTTGCGTACTTACAGAACTGCTTCTGTTACTGTTTTTGCCAATTATTTCTCTGCTAGGAATATCAGCTTCAAGAACACAGCGCCAGCACCGATGCCGGGAATGCACGGATGGCAAGCGGCGGCCTTTCGAATATCTGGAGACAAAGCATACTTCTCTGGGTGTGGATTCTACGGTGCGCAGGACACTCTTTGCGACGACGCTGGCAGGCATTATTTCAAAGAATGCTACATTGAGGGCTCTATAGATTTCATCTTTGGGAATGGCAGGTCAATGTACAAGGACTGTGAGCTGCATTCTATTGCTACGAGGTTCGGGTCCATAGCTGCGCACGATAGAAGATTGCCATACCAGAAAACAGGCTTCGCATTCGTACGGTGTAGGGTGACGGGTACAGGCCCTCTATACGTGGGCCGGGCTATGGGCCAGTACTCAAGAATTGTTTACTCCTATACGTACTTCGACGACATCGTTGCTCGCGGTGGCTGGGATGATTGGAACCATGCCGATAACAAGAACAAGACTGTGTTCTTCGGAGTTTACAAGTGTTGGGGTCCAGGAGCTGCGGCGGTGCGTGGGGTCTCATGGGCCCGAGAGTTAGATTTCGAAACTGCCCATCCATTTCTGGTCAAGAGTTTCGTCAATGGAAGACACTGGATTGCCCCCTCTGATGCCTA 1082 0.4908 MAYSLSLYLLLVCICLCLFHVLTVTCTTYGDKTPKVVSSSNSSQHRHHKWVGPVGNRVITVDVNGGGHFRSVQAAVNSVPENNGMNVLIQISAGYYIEKVVVPATKPYITFQGAGKDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMHGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRRLPYQKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVARGGWDDWNHADNKNKTVFFGVYKCWGPGAAAVRGVSWARELDFETAHPFLVKSFVNGRHWIAPSDA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01981 360 ProSitePatterns Pectinesterase signature 2. 213 222 IPR033131 -
Bva11g01981 360 Gene3D - 55 359 IPR012334 -
Bva11g01981 360 PANTHER PECTINESTERASE 68-RELATED 23 359 - -
Bva11g01981 360 Pfam Pectinesterase 59 351 IPR000070 GO:0030599|GO:0042545
Bva11g01981 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 359 - -
Bva11g01981 360 SUPERFAMILY Pectin lyase-like 55 357 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01981 Bva-Chr11 16869496 16871935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01981 3 360 Carbohydrate Esterase AT5G47500 74.095 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01981 - - gmx:100816190 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00319 08 1561970 1564498 Bva11g01981 11 16869496 16871935 BWGD
Bva11g01981 11 16869496 16871935 Bva11g01981 11 16869496 16871935 ECH