Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01961 ATGGACGGCAAAGATTCATTTTCAGATCAGTGCTTCTACTATAAAGCTTACCGCTTCTTTCCAAACCCTAGCTCTCTTTTTGCGAGCGTAAAACGAGACAACACGTCTCGGTTCATTTGTAGTCCGATGGGTGCCTACAAGTATGTATCAGAGCTTTGGCGTAAGAAGCAGTCTGATGTCCTGAGATTCTTGCAGAGGGTGAGGTGTTGGGAATATCGTCAACAACCTTCCATTGTCCGTTTGACGAGGCCAACTCGTCCTGACAAAGCTCGTCGCTTAGGATATAAGGCTAAGCAGGGGTATGTCATTTACCGTGTTCGTGTCCGGAGGGGTGGCCGAAAGAGGCCAGTTCCTAAAGGTATTGTGTATGGGAAGCCCACAAATCAAGGTGTCACTCAACTGAAATTTCAGCGGAGCAAGAGGTCAGTAGCTGAGGAGCGTGCTGGTCGGAAGCTGGGTGGCCTTAGAGTACTCAATTCTTATTGGGTGAACGAGGACTCAACTTACAAGTACTTTGAGGTAATCCTGTTAGATGTTGCCCACAATGCTATCAGAAATGATCCAAGAATCAATTGGCTATGCAATCCCGTTCACAAACATAGGGAGCTACGTGGTCTCACTTCTGCCGGGAAAAAATACAGGGGACTACGGGGCAGAGGACATCTTTACCTCAAAGCACGGCCGTCCCGCAGGGCAACCTGGAAGAGGAACAATACCCTCTCTCTCCGTCGTTACCGTTG 740 0.4865 MDGKDSFSDQCFYYKAYRFFPNPSSLFASVKRDNTSRFICSPMGAYKYVSELWRKKQSDVLRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEVILLDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLYLKARPSRRATWKRNNTLSLRRYR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01961 246 PANTHER RIBOSOMAL PROTEIN L15 28 246 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva11g01961 246 Pfam Ribosomal L15 44 232 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva11g01961 246 ProSitePatterns Ribosomal protein L15e signature. 88 111 IPR020925 GO:0003735|GO:0005840|GO:0006412
Bva11g01961 246 Gene3D Ribosomal protein l15e 43 246 IPR024794 GO:0003735|GO:0005840
Bva11g01961 246 PANTHER RIBOSOMAL PROTEIN L15 28 246 - -
Bva11g01961 246 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 43 237 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bva11g01961 246 SMART Ribosomal_L15e_2 44 235 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01961 Bva-Chr11 16769677 16772699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01961 43 246 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 89.706 3.76e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01961 K02877 - zju:107405349 396.741