Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01946 ATGCGTATAGAGGAATTTAAGGGGGAGGAGGTGGAAGGCGGAGAGAAAGGAAAGTCGTACATTGAGAATGATGATTCCGGCGGGGCAGGTTTTCTTGGGTCTGATGCTAAAAGGATTTTGGTCGGAGCTGGAGCTCGTGCGCTATTCTATCCCACTCTGATTTACAACGTCGTCAGGAATAAGATTCAGACGGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTTATATTATTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCGCTTAAAGGAGCTTGGTGTCTGTGGAGTCATCACATTGAATGAAGCATACGAGACTTTGGTTCCTACCACATTATATCAAGCTCATGGTATTAAGCATCTTGTGATTCCTACTAGGGACTACTGTTTTGCTCCATCAATGCGTGACATATGCCATGCTGTGGACTTCATTCATGAAAATGCATTGTCCGGACAAACTACATATGTTCACTGCAAAGCTGGACGTGGTCGCAGCACAACAATTGTTATCTGTTACCTGGTGCATTACAAGTTGATGACCCCTGACGCCGCATacaattatgtaaaattaatccGGCCAAGGGTTCTTTTAGCTTCGTTACAGTGGCAAGCTGTTCAGGACTACTACCATCTTATGGTGAGGAGGACTGTCACTCGTGCTCCCATGGCCAATATAGTAGTGAAAGCATCTGAGGCGACAGCAGCTTCGCAAGGCCTTGTCACATTTGACGATTCTTCTGTAGTTGTGGTAACAGAATCTGATCTTGAAGGATATGACCCAAGAATTCATTCAGGTACTGTGGCAAATAAGATATGGACAGATTTAAGCATAGTTTATCGTGTCCGAGTTTCTGGAGAGGCGGCACTGTCAAGAATATCCTGCCTGTGGTTGCCATACCGGACACACCAGAAGATTTCTGGGGAGGAATTGAGCCGGGAGAGTGGCTGCTCGCTAAGGACTAGTCACTTGGATAGCATTAGTGTTGATATCCAAGTctactg 1004 0.4472 MRIEEFKGEEVEGGEKGKSYIENDDSGGAGFLGSDAKRILVGAGARALFYPTLIYNVVRNKIQTEFRWWDKVDEFILLGAVPFPIDVPRLKELGVCGVITLNEAYETLVPTTLYQAHGIKHLVIPTRDYCFAPSMRDICHAVDFIHENALSGQTTYVHCKAGRGRSTTIVICYLVHYKLMTPDAAYNYVKLIRPRVLLASLQWQAVQDYYHLMVRRTVTRAPMANIVVKASEATAASQGLVTFDDSSVVVVTESDLEGYDPRIHSGTVANKIWTDLSIVYRVRVSGEAALSRISCLWLPYRTHQKISGEELSRESGCSLRTSHLDSISVDIQVY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01946 334 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Bva11g01946 334 PANTHER - 1 334 - -
Bva11g01946 334 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Bva11g01946 334 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 334 - -
Bva11g01946 334 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bva11g01946 334 Pfam Dual specificity phosphatase, catalytic domain 108 207 IPR000340 GO:0008138|GO:0016311
Bva11g01946 334 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bva11g01946 334 Gene3D Protein tyrosine phosphatase superfamily 68 217 IPR029021 -
Bva11g01946 334 MobiDBLite consensus disorder prediction 1 21 - -
Bva11g01946 334 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 213 IPR029021 -
Bva11g01946 334 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01946 Bva-Chr11 16683121 16686484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01946 1 334 Protein tyrosine phosphatase (PTP) family AT2G35680 57.386 1.04e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01946 - - gmx:100790413 489.96