Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01927 ATGGGCAAACAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGAAATGGGCCGCCAGAGAAGCCAGTGCTATGCAATGCATGTGGATCTCGGTGGAGGACAAAGGGAACACTTGCAAATTATACTCCTTTACATGCTCGGGCAGAAACTGATGAATATGAGGATCAGAGGGCTTCTAGGGTGAAGAGCATATCATTAAATAAGAACAAAGAAGCGAAATTGCTCAAGCGAAAGCAGAATTATGATAATGTAGTATATGGAGGTTTTACTCCTGATAACAACCAGGGATTCCGAAAAGTTATAGATGAAGATGTGAGCAATAGATCAAGTTCTGGATCGGCTGTCTCTAACTCAGAGAGCTGTGCTCAATTTGGTGGAACAGATGCTAGTGACTTGACAGGTCCTGCTCAATCAGTTGTCTGGGATACGATGGTGCCTTCGAAAAAGAGGACATGCGTCAATCGTCCTAAGCCATCTTCTGTTGAGAAGCTCACAAAAGATTTATATACTATCCTTCATGAACAACAGTCGTATTTATCTGCCTCTTCTGAAGAGGACCTTCTTTTTGAAACTGAAACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCGTTCTCATTAGGCACCCTAGTTCTATAGCTCGTGAAGAAGAGTCTGAGGCTAGTTCTCTTTCAGTTGATAACAAACAATGCCCAACAAGTGAGGCATATTCCTGTTCTGGCGCCATTCCTATGCATAATAATTGGAATGGTATGAACTTCTCATCTCAAAGgGACAAATCTCAGCATGAAAGTGTTCATGCCCTGGGAAATCACAACTCGCCACTGTGCTTAATAGATTTAAATGATGTCATAAACTACGAGGAGTTTATGAAACAATTGACAAATGAAGAGCAGCAACAATTGCTGAATTGTCTACCTCTGGTTGATACGGCTAAACTTCCTGACAGCATTAAGAGCATGTTCAATAGCTCCCAATTCAAGGAGAACTTAACTTACTTTCAGCAACTTCTCATGGAAGGTGTCTTTGATATATCCTTACTGGGGGCAAAACCTGAAGACTGCAAGACTTTAAAAAGGCTTGCTTTATCCAATCTATCTAAATCAAAATGGGTGGAACATTATAATTTACTTAAGAGATGTAAAAACAGAGTTGAAAAGCCTGTTACTCCGGTTTCCACTGGCATTGCATCAAGTAATGTTGCAAATGTCAAGAAATTGCGCGACagccaaaatcaaaattttccagAAACAAAGACAATAATGAGAAGCCCAAAAAGAGTGGCGACGAAGGCTGGGTATGGGGGCAAGGAGGTTATAGAAGATGGGTCTTGCTTCAGTCCAAAGAGCTTATTTGCTTTACCCGCTGATGGTAGCTCGCTGATGCTGGATTCTTTCAACTTTGTTGAGGAGAGTTCTGATCAGGATTTGCTGTTGGAGGTGCCGTCCAACAGTTCTTTTCCACAGGCAGAGCTACTGCACCCAACAATAAGCTTTGGTGCTCAAGCCAGCACCAGTAGTAGCTCAAGACACCCACATCTTCTCCATCCCTG 1565 0.4211 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETDEYEDQRASRVKSISLNKNKEAKLLKRKQNYDNVVYGGFTPDNNQGFRKVIDEDVSNRSSSGSAVSNSESCAQFGGTDASDLTGPAQSVVWDTMVPSKKRTCVNRPKPSSVEKLTKDLYTILHEQQSYLSASSEEDLLFETETPMVSVEIGHGSVLIRHPSSIAREEESEASSLSVDNKQCPTSEAYSCSGAIPMHNNWNGMNFSSQRDKSQHESVHALGNHNSPLCLIDLNDVINYEEFMKQLTNEEQQQLLNCLPLVDTAKLPDSIKSMFNSSQFKENLTYFQQLLMEGVFDISLLGAKPEDCKTLKRLALSNLSKSKWVEHYNLLKRCKNRVEKPVTPVSTGIASSNVANVKKLRDSQNQNFPETKTIMRSPKRVATKAGYGGKEVIEDGSCFSPKSLFALPADGSSLMLDSFNFVEESSDQDLLLEVPSNSSFPQAELLHPTISFGAQASTSSSSRHPHLLHP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01927 521 MobiDBLite consensus disorder prediction 110 137 - -
Bva11g01927 521 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Bva11g01927 521 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 276 388 IPR044867 -
Bva11g01927 521 PANTHER GATA TRANSCRIPTION FACTOR 26 1 521 - -
Bva11g01927 521 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Bva11g01927 521 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Bva11g01927 521 MobiDBLite consensus disorder prediction 108 137 - -
Bva11g01927 521 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Bva11g01927 521 PANTHER OSJNBB0038F03.10 PROTEIN 1 521 IPR044589 -
Bva11g01927 521 Gene3D - 271 373 IPR038108 -
Bva11g01927 521 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Bva11g01927 521 Pfam Asx homology domain 261 348 IPR028020 -
Bva11g01927 521 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Bva11g01927 521 Gene3D - 3 84 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01927 Bva-Chr11 16578536 16584917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01927 1 498 C2C2-Gata Transcription Factor Family AT4G17570 56.202 1.53e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva11g01927 ASXH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01927 - - gmx:100798504 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00371 08 1833943 1840117 Bva11g01927 11 16578536 16584917 BWGD