Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01926 ATGAACTTATCTGTAGGGAACAAGAGTATGGGTAAACAAAACTTGGCTGTAGATGACAAGCCATTGAGAATTGTAGCATCCACTGGCACAAATGAAGTGGAAAAGAAAGTTCAAGATGGAGATGCTTGCAAGGGCAGGCAGGTGGACATCCTTCGAATTGATTCTGAAGGGAATGATACGGAGCAAGTTGAATTTGAATCATCTTCTGAGAAGAAATTGCCACTGGAAAATGCAAGAGAAAAATGTGCTTTAATTCCTAGTGAAAGTAATCACTATCAGGTTCAACTGAATTCTGCGATTGTAGTTGAAGAAAAAGGGGAGGCTGTTCAGTTTGAAGGAAATTCTGGGAAGCAGATCATAGTTTGCCCAGAAGCCCAAAGTCTTGGGACAAAGTCTTCAGATGTATCTGATCGTCAAGGGTtgaaaagagattttaatGAACAACTGGTTGTGTCTGACAGGATGGTTGTGTTAGCATTGATGTCTGAATCAGAATGTCCTCGGAGGCATGGTAGAGATTCCtccaaatataatttgatcggtggtgaaaatgaaagcaaggaaaagaaagattgTGGGAAAGGAGGGAAGAATTccaaaaagttcaaaataagAGAGGGTCTATGGGCTGATGACATTTCTTTcaggaaagagaaaattgaaagtCTTGGGACAAAGCCTTCGGATGTATCTGGTCTTCAGCGTGGGTtgaaaagagattttaatGAACAACAGGTTGTATCAGACAGGATAACTGTGTTAGCTCTGATGTCTGAATCAGAATGTCCTTGGAGGCATGGTAGAGGTTTCTCCAAACATAATTTGGaaagcaaggaaaagaaagttacTCGGAGTCGGAATGGATTGAAGAATtccaaaatgttaaaaataagagCGGGTTTATGTGTTGATGACATTTCTTTTGGGAAagagaaaactaaaatttgtGCTCTGAACACCATAGATAATGAAAATCCCCCACTCTTTCAATACAGCACTAGCATGATGTATCCTAATTGGTGCAATCCCGTTCCTCCAGAGGGATGTAATTGTACTAATGGATGTTCTGATTCAGAGAGATGTCCTTGTGCTGTCAAAAATGGTGGGGAGATCCCATTCAATCATAAAGGGGCTATTATAGAAGCAAAATCTCTAGTCTACGAGTGTGGTCCTAATTGCAGGTGCCCTTCATCTTGCTATAACAGAGTTAGCCAACATGGCgtaaaatttcaacttgaaatttttaaaaccaagACAAGAGGATGGGGTGTCAGATCTCCAAATTCTATTCCTTCAGGAAGTTTTGTCTGTGAATATATCGGAGAGCTTCTTGACGAGAAGGAAGCTGAAGAAAGAACTGGTAATGATGAGTATCTGTTTGATATTGGCAATAACTGCAACGACAATACTATCTGGGACACACTTTCAACCCATACGCCTGATTCACGGTCACGTTCCTCTGAAGTTGCGGGGGATGGTGGCTTCACCATTGATGGAGCTCAGTATGGTAACGTAGGGAGATTTATCAACCATAGTTGTTCCCCTAATCTTTATGCTCAAAACGTCCTTTATGATCACGATGACAACAGGATCCCTCACATAATGTTCTTTGCTGCCGAGAACATTCCCCCCTTGCAAGAACTGACTTACGATTACAATTATATCATAGATCAAATCTATGATTCGGATGGCaatataaagaagaaagattgcTATTGTGGTTCTGTGGAGTGTACTGGTAGGATGTACTG 1751 0.3678 MNLSVGNKSMGKQNLAVDDKPLRIVASTGTNEVEKKVQDGDACKGRQVDILRIDSEGNDTEQVEFESSSEKKLPLENAREKCALIPSESNHYQVQLNSAIVVEEKGEAVQFEGNSGKQIIVCPEAQSLGTKSSDVSDRQGLKRDFNEQLVVSDRMVVLALMSESECPRRHGRDSSKYNLIGGENESKEKKDCGKGGKNSKKFKIREGLWADDISFRKEKIESLGTKPSDVSGLQRGLKRDFNEQQVVSDRITVLALMSESECPWRHGRGFSKHNLESKEKKVTRSRNGLKNSKMLKIRAGLCVDDISFGKEKTKICALNTIDNENPPLFQYSTSMMYPNWCNPVPPEGCNCTNGCSDSERCPCAVKNGGEIPFNHKGAIIEAKSLVYECGPNCRCPSSCYNRVSQHGVKFQLEIFKTKTRGWGVRSPNSIPSGSFVCEYIGELLDEKEAEERTGNDEYLFDIGNNCNDNTIWDTLSTHTPDSRSRSSEVAGDGGFTIDGAQYGNVGRFINHSCSPNLYAQNVLYDHDDNRIPHIMFFAAENIPPLQELTYDYNYIIDQIYDSDGNIKKKDCYCGSVECTGRMY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01926 583 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 289 582 - -
Bva11g01926 583 Gene3D SET domain 295 583 IPR046341 -
Bva11g01926 583 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 289 582 - -
Bva11g01926 583 Pfam Pre-SET motif 306 402 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva11g01926 583 SMART PostSET_3 567 583 IPR003616 -
Bva11g01926 583 Pfam SET domain 421 553 IPR001214 GO:0005515
Bva11g01926 583 ProSiteProfiles Pre-SET domain profile. 347 407 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva11g01926 583 SMART set_7 410 559 IPR001214 GO:0005515
Bva11g01926 583 ProSiteProfiles SET domain profile. 410 553 IPR001214 GO:0005515
Bva11g01926 583 MobiDBLite consensus disorder prediction 169 197 - -
Bva11g01926 583 SMART preset_2 303 394 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva11g01926 583 ProSiteProfiles Post-SET domain profile. 567 583 IPR003616 -
Bva11g01926 583 SUPERFAMILY SET domain 293 554 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01926 Bva-Chr11 16573351 16576270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01926 300 583 EF-hand Containing Proteins AT5G13960 41.137 4.35e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva11g01926 SET 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01926 K11420 - jre:108991569 498.049