Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01925 atGGAACTTCATTCTAAAGAACTACTTGGCCTTGGCATGATTCTACTCTTGCCTGCACTATGTACCTCTCAATACGATTTTACTAGTTCCAGAGCAACCTATTATGGCAGCCCAGATTGCTATGGGACTCCAAGGGGAGCTTGTGGCTTTGGCGAATATGGAAGCACAGTCAACGATGGAAATGTGGCAGGCGTGTCTAGGCTATGGATGAATGGATCTGGTTGTGGTGCATGCTATAAGGTTAGGTGCAAAATACCGCAATACTGCGATGACGACGGAGCAAATGTGGTGGTGACGGATTATGGTGAGGGAGACAGAACAGACTTCATCATGAGTCCCCGTGCCTACTCAAGATTAGGACGCAACCCAGATGCTTCAGCAGAACTCTTCAAATACGGCGTCGTTGATGTAGAATTCAAAAGAGTCCCTTGTAGATACGCTTACAACATCCTCGTCAAGATCCACGAGCACAGCAGAAACCCTCACTACTTAGCTATCTTGGTTCTCTATGTTGGTGGAATAAACGACATCACTGCTGTTCAGTTGTGGCAGGAGGACTGCAAAGAATGGAGGCCTATGCGCAGAGCGTTTGGAGCCGTATTCGACTTTGAAAACCCACCTAGTGGTCAAATTAACTTGAGGCTCCAAATGAATGGCAGGGCAGACTGGGTGCTGCTCAGAAGACCTATCCCTGGCGATTGGGAGGCTGGGGCTGCTTATGCAACGGACATTCAGTTCTATTA 743 0.4791 MELHSKELLGLGMILLLPALCTSQYDFTSSRATYYGSPDCYGTPRGACGFGEYGSTVNDGNVAGVSRLWMNGSGCGACYKVRCKIPQYCDDDGANVVVTDYGEGDRTDFIMSPRAYSRLGRNPDASAELFKYGVVDVEFKRVPCRYAYNILVKIHEHSRNPHYLAILVLYVGGINDITAVQLWQEDCKEWRPMRRAFGAVFDFENPPSGQINLRLQMNGRADWVLLRRPIPGDWEAGAAYATDIQFY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01925 247 Pfam Lytic transglycolase 62 138 IPR009009 -
Bva11g01925 247 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Bva11g01925 247 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bva11g01925 247 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Bva11g01925 247 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Bva11g01925 247 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bva11g01925 247 Gene3D - 19 145 IPR036908 -
Bva11g01925 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 162 242 IPR007117 -
Bva11g01925 247 PANTHER EXPANSIN-B1-LIKE PROTEIN 5 246 - -
Bva11g01925 247 SUPERFAMILY Barwin-like endoglucanases 15 147 IPR036908 -
Bva11g01925 247 Pfam Expansin C-terminal domain 152 227 IPR007117 -
Bva11g01925 247 Gene3D - 146 247 IPR036749 -
Bva11g01925 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Bva11g01925 247 SUPERFAMILY PHL pollen allergen 149 241 IPR036749 -
Bva11g01925 247 PANTHER EXPANSIN-B3 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01925 Bva-Chr11 16572006 16573350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01925 4 244 Expansin Gene Family AT4G17030 60.408 4.99e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01925 - - gmx:100802855 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00375 08 1856783 1858029 Bva11g01925 11 16572006 16573350 BWGD