Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01921 ATGGAGGAGCGGTACGAGCCATTGAAGGAGCTTGGTTCTGGGAATTTTGGAGTGGCGAGGTTGGTTAGAGATAAGAAGACTACTGGGCTCGTTGCTGTAAAATACAtcgaaaggggaaaaaagATTGACGAAAATGTTCAAAGAGAGATCATTAACCACCGATCTTTAAGGCATCCGAACATTATTAAGTTCAAAGAGGTGGTGCTGACTCCTACTCATTTAGCCATTGTGATGGAATATGCTGCAGGTGGCGAACTCTTTGAAAGGATATGCACTGCTGGTCGATTTAGTGAAGATGAGGCAAGGTTTTTCTTCCAGCAGCTAATATCTGGAGTTAGCTACTGTCATTCCATGCAAATTTGTCACAGAGATCTAAAACTGGAAAACACCCTCTTGGATGGAAGCCCAACACCCCGTCTTAAAATTTGTGACTTCGGTTATTCCAAGTCTGCTTTGCTTCACTCTCAACCCAAATCAACAGTTGGAACTCCTGCGTACATTGCTCCAGAAGTTCTGAGTCGGAAGGAGTATGATGGGAAGATTGCAGACGTTTGGTCCTGTGGTGTGACTCTGTATGTGATGTTAGTTGGAGCATACCCATTTGAAGATCCCGAAGATCCTAGAAATTTCAGAAAGAGCATTACGAGAATAATGAATGTTCAATACTCCGTACCAGACTATGTGCGTTTCTCTGCAGATTGCAAGCATCTTCTTTCTCGCATCTTCGTTGCCAATCCTGCCAAGAGGATCACCATCTCAGATATAAAGCAGCACCCTTGGTTTCTGAAGAACTTGGCTAAAGAGATCGTTGAAGCAGAGAAGAAAAGCTTTGAGGAAGGACAAAAAGAGCAGCCAAGTCAGAGCGTTGAAGAAATCATGCGGATCATACAGGAAGCAAGGACGCCGGGGCAAAGTTCAAAAGGCGATGGCCAAGCTGGTGCAGGGACATTGGACGGCGAGGAATCTGAAGTTGATGTTAGCGGTGACCATGCAAATGCCGTGTG 1004 0.4432 MEERYEPLKELGSGNFGVARLVRDKKTTGLVAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEVVLTPTHLAIVMEYAAGGELFERICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKSITRIMNVQYSVPDYVRFSADCKHLLSRIFVANPAKRITISDIKQHPWFLKNLAKEIVEAEKKSFEEGQKEQPSQSVEEIMRIIQEARTPGQSSKGDGQAGAGTLDGEESEVDVSGDHANAV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01921 334 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01921 334 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Bva11g01921 334 MobiDBLite consensus disorder prediction 296 334 - -
Bva11g01921 334 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01921 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Bva11g01921 334 CDD STKc_SnRK2 4 260 - -
Bva11g01921 334 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Bva11g01921 334 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Bva11g01921 334 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01921 334 PANTHER SERINE/THREONINE KINASE 3 326 - -
Bva11g01921 334 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 326 - -
Bva11g01921 334 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01921 Bva-Chr11 16552846 16555768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01921 4 264 CBL-interacting serine-threonine protein kinases AT4G24400 42.751 2.99e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Bva11g01921 Pkinase 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01921 K14498 - fve:101307307 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00388 08 1939253 1942668 Bva11g01921 11 16552846 16555768 BWGD
Bva11g01921 11 16552846 16555768 Bva11g01921 11 16552846 16555768 ECH