Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01913 ATGAAGTGTTTCTTCTTCAGAAGGTTATCAAGGTCTAACCAGGAATTGCAAAACAAAAGgagcaagaagaagaaatatccAGCTGGGGCGTCCAAGTCTACGAGTTCGCTTGCGTCGTCGCCAAGGAGCGTAAGTGAATTGTACAAAGAGAAAGAGCACAATTTGAAAGTTCTTACATTGGAAGAGCTTAGTGAAGCAACCAATGGTTTCAGTAGGATGCAAAAGATTGGAGAAGGGGGTTTTGGGAGCGTGTATAAAGGTACAATTAGGCCTCAAAATGGCTGTGGTCATCCAATTCTAGTTGCCATAAAAAGGCTTAATACGCGTGGCTTTCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTGGGCATTGTTAATCACCCGAATCTGGTAAAACTTCTGGGATACTGTTCCGTGGATGGAGAAAGAGGAATCCAGAGGCTGTTAGTGTATGAGTTCATGCCTAACAGGAGCCTGGAAGATCATGTTTTCAATAATGCATCCCCCGTCTTGCCTTGGAAAACAAGATTGCAGATCATGCTCGGAGCTGCCCAAGGAATAGCTTATCTACACGAGGAATTGGAGGTTCAGGTGATTTACCGAGATTTTAAATCTTCAAATGTTCTACTGGACAATGACTTCCATCCAAAGCTCTCAGATTTCGGTCTTGCTAGGGAAGGCCCAGTAGGTGACCAGACTCATGTATCAACTGCGgtGGTTGGGACGCGTGGTTATGCTGCTCCAGAGTATGTTGAAACGGGCCATCTCAAAGTTCAGAGCGACGTTTGGAGTTTTGGTGTAGTACTGTATGAAATCCTCACGGGGAGGCGGGCATTGGATAGAAACCGTCCAACGATGGAACAAAAGCTTTTAGATTGGGTTAAACAGTATCCTGTTAACAGTAGCAGCTTCAGCATGATAATAGACCAACGGCTGAGAAACCAATATTCTATTGCTTCAGCTCGGAAAATTGCCAAGTTGGCTGATAGCTGCTTAAAAAAGAATCCTGAAGATAGGCCTTCCATGAGTCAGATTGTGGAAAGCTTGAAGCAAGCATTGTA 1067 0.4339 MKCFFFRRLSRSNQELQNKRSKKKKYPAGASKSTSSLASSPRSVSELYKEKEHNLKVLTLEELSEATNGFSRMQKIGEGGFGSVYKGTIRPQNGCGHPILVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHVFNNASPVLPWKTRLQIMLGAAQGIAYLHEELEVQVIYRDFKSSNVLLDNDFHPKLSDFGLAREGPVGDQTHVSTAVVGTRGYAAPEYVETGHLKVQSDVWSFGVVLYEILTGRRALDRNRPTMEQKLLDWVKQYPVNSSSFSMIIDQRLRNQYSIASARKIAKLADSCLKKNPEDRPSMSQIVESLKQAL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01913 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Bva11g01913 355 PANTHER OS01G0588500 PROTEIN-RELATED 15 355 - -
Bva11g01913 355 MobiDBLite consensus disorder prediction 28 43 - -
Bva11g01913 355 SUPERFAMILY Protein kinase-like (PK-like) 53 351 IPR011009 -
Bva11g01913 355 Gene3D Transferase(Phosphotransferase) domain 1 156 355 - -
Bva11g01913 355 PANTHER RECEPTOR-LIKE KINASE PLANT 15 355 - -
Bva11g01913 355 Gene3D Phosphorylase Kinase; domain 1 30 155 - -
Bva11g01913 355 CDD STKc_IRAK 76 353 - -
Bva11g01913 355 MobiDBLite consensus disorder prediction 13 43 - -
Bva11g01913 355 Pfam Protein kinase domain 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01913 355 PIRSF ILK 44 355 - -
Bva11g01913 355 ProSiteProfiles Protein kinase domain profile. 70 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01913 355 ProSitePatterns Protein kinases ATP-binding region signature. 76 104 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01913 Bva-Chr11 16515518 16518078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01913 3 351 Glycoside Hydrolase AT3G07070 40.669 4.68e-88 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva11g01913 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01913 - K00924 gmx:100305403 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00397 08 1983075 1986303 Bva11g01913 11 16515518 16518078 BWGD
Bva11g01913 11 16515518 16518078 Bva11g01913 11 16515518 16518078 ECH