Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01891 ATGGTTTGCACTGCCAATGATTTACAGAAATGGAAAGATTTTCCCAAGGGACTTCGGGTTCTTCTCATCGACGGAGATACCAATTCTGCTGCCGAGATAAGTGCAAAGCTCGAGGCTATGGAGTATATTGTGTCTACATTCTGCGACGAGAATGAAGCCTTGTCAGCAATCTCGAGCAAAACTGAAGAATTCCATGTTGCTATAGTGGAGGTAAGTATAAGCAGTACCCAGGACAGTTTTAAATTTCTCGAGAATGCCAAGGACTTGCCTACTATTATGACTTCAAGCGAACATTGCCTGAGCACCATGATGAAGTGCATAGCGcttGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCTGAGGACAAGCTTAGGAATATCTGGCAGCATGTGGTTCACAAGGCTTTCAACGCTGGGACAAGTGTCCTGTCTGATTCACCAAAACCTGACAAAGAATCTGTAGTGTCCACGTTGAAGCTCCAAATGGACAACGGACAGCAAGAAAATGGGGTGTCAATAGATTTAGGTAAGGTTTCCAGGTCTACTGATAATGACTTGGACCAGTCTGTAGGAAGTGATAAATTCCCAGCTCCTTCAACCCCACAGTTAAATCAGGGAGCAAGGTTACTTGATGATGGGGATTGCCAAGAACAGACTAATTGCTctacagaaaaagaaaatggagaacaTGAAGGGAAATCCAAATCTGTCGAAACTACACGTGAGACTTTATGTGGTGATGGTATTCTTCCACCAAATAAACCTGAAAAGACTTCGAAGGAGGAGGAGGACTTTGTTGATGATGGTTCTAAGAAGGAAAATACTGTTTCTCCACATCCAACTAATAAAATGCTTCTCGGCAACATTGATGGTGGTACTGCATCTCCTAATAAAGCTGGTGTCCGTGATGATCCATGCGATACCAAATCAAAtcgaaagaaaacaaagGTAGACTGGACACCCGAGTTGCACAAAAAATTTGTGCAAGCAGTGGAACAACTTGGTGTCGATCAAGCCATTCCTTCTAAAATACTGGAGCTAATGAAAGTAGAGGGCTTGACAAGGCATAATGTAGCAAGCCATCTCCAGAAATATAGAATGCATAAGAGGCAAATATTGCCCAAGGAAGAAGATCGAAGGTGGCTACATCAAAGAGATCCAATTCAACGGGGCTATTGCCTACAAAGACCTATGATGGCGTTTCCACCATACCAGTCTAACCGCACCCTGGCTCCTGCTCCTGTGTATCCAATGTGGGGACAACCTGGTAGTCATCTACCTGGTTTGCAGGTGTGGAGCCCACCTGGTCTTCCCGTGTGGCGGCCTACAGAAAGTTGGCACTGGAAGCCTGTTTCAGGGATGCATGCTGATGCATGGGGTTGCCCAGTGTTGCCACCTCCTCAAGGTCCTTGTTTTCCCTACTCTCAACAGAGTATACCTGGATTTCGCAATACTAATGCAGTCAATTATAGCTCTAGCATGCCACGAAGTACCTTTGAGCTGAATCCGGAAGAGGAGGTTATTGACAAGGTAGTAAAGGAGGCCATAAGCAAGCCATGGCTACCCATGCCCTTAGGCCTAAAACCTCCTTCTACAGATAGTGTATTGGCTGAGCTCTCCAGGCAAGGCATTTCCAACATCCCTCTTGGCAACAAGGGTAGCTCTGACCCCAGCTG 1676 0.4475 MVCTANDLQKWKDFPKGLRVLLIDGDTNSAAEISAKLEAMEYIVSTFCDENEALSAISSKTEEFHVAIVEVSISSTQDSFKFLENAKDLPTIMTSSEHCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGTSVLSDSPKPDKESVVSTLKLQMDNGQQENGVSIDLGKVSRSTDNDLDQSVGSDKFPAPSTPQLNQGARLLDDGDCQEQTNCSTEKENGEHEGKSKSVETTRETLCGDGILPPNKPEKTSKEEEDFVDDGSKKENTVSPHPTNKMLLGNIDGGTASPNKAGVRDDPCDTKSNRKKTKVDWTPELHKKFVQAVEQLGVDQAIPSKILELMKVEGLTRHNVASHLQKYRMHKRQILPKEEDRRWLHQRDPIQRGYCLQRPMMAFPPYQSNRTLAPAPVYPMWGQPGSHLPGLQVWSPPGLPVWRPTESWHWKPVSGMHADAWGCPVLPPPQGPCFPYSQSIPGFRNTNAVNYSSSMPRSTFELNPEEEVIDKVVKEAISKPWLPMPLGLKPPSTDSVLAELSRQGISNIPLGNKGSSDPS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01891 557 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 551 IPR044825 GO:0003700|GO:0045893
Bva11g01891 557 Pfam Myb-like DNA-binding domain 317 366 IPR001005 -
Bva11g01891 557 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Bva11g01891 557 MobiDBLite consensus disorder prediction 161 313 - -
Bva11g01891 557 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Bva11g01891 557 MobiDBLite consensus disorder prediction 223 240 - -
Bva11g01891 557 SUPERFAMILY Homeodomain-like 312 371 IPR009057 -
Bva11g01891 557 CDD REC_typeB_ARR-like 20 132 - -
Bva11g01891 557 Gene3D - 310 372 - -
Bva11g01891 557 SUPERFAMILY CheY-like 16 134 IPR011006 -
Bva11g01891 557 MobiDBLite consensus disorder prediction 254 274 - -
Bva11g01891 557 MobiDBLite consensus disorder prediction 161 206 - -
Bva11g01891 557 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 314 369 IPR006447 GO:0003677
Bva11g01891 557 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2 1 551 - -
Bva11g01891 557 Gene3D - 18 140 - -
Bva11g01891 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 311 370 IPR017930 -
Bva11g01891 557 SMART REC_2 18 128 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01891 Bva-Chr11 16373884 16379215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01891 1 547 Response Regulator Gene Family AT4G18020 51.291 8.41e-152 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva11g01891 Response_reg 1.3e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01891 - - gmx:100784905 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00422 08 2170845 2176069 Bva11g01891 11 16373884 16379215 BWGD