Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01882 ATGGGTTGCTTACACTCCAAAACCGCTCACCTTCATTCTCTTGACGAACCATCCGACTTGCTCGACTCTAAGAAACCCGATCCAGCTCATGGGGATGATCTTGATCAAGAATGTCAAGTTCCAGCATTCAAAGAGTATGATCTTACTGAACTCCGAAGGGCCACAAATGAGTTTAGCACTGATTACATTGTATCAGAGAGTGGCGAGAGAGCTCCCAATGTGGTCTACAGAGGGAAGCTGGAGAACAATCGGTTGGTTGCTGTTAAACGGTTCTCCAAACAGTCTTGGCCTGACGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGAAAAGTGAGGCACAAGAGACTGGTAAATCTAATTGGTTGTTGTGCTGAGGGAGATGAACGGCTTTTGGTGGCTGAGTATATGCCAAATGATACCCTGTCCAAGCATCTCTTTCATTGGGACAAGCAGCCATTACCATGGGAAATGCGGGTTAGAGTTGCACACCATGTTGCACAGGCACTAGATCATTGTAGTATGGAGAACCGaaaaatttatcatgattTAAACGCATACAGGATACTTTTTGATGAGGATGGTGATCCCCGTTTGTCAAGTTTTGGTCTTATGAAAAATAGTCGAGATGGAAAAAGCTATAGCACTAATTTAGCCTACACTCCACCAGAGTTTTTGCGGACAGGGAGGATTATCCCAGAGAGTGTAATCTACAGCTATGGAACGGTACTCTTGGATCTTTTAAGCGGCAAGCATATTCCTCCAAGCCATGCTTTGGATCTGATTAAAGGGAAAAATGCATTGTTGTTGATGGACTCATCCCTAGAAGGGCAGTATGCAAATGATGATGCTACAAATTTAGTCGATCTTGCTTCAAAGTGTCTTCAGATTGAGGCCAGAGAACGACCTGATATCAAGTTTCTTCTTTCCGCAGTCGCCCCTCTTCAAAAGCAGAAAGAGGTTGCATCTTATGTGCTGATGGGCATTTCTAAAAATACACCAGTCCTGCCAACCATGCTATCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAACGAGCTATCATTCCAAGAGTGGACGCAACAAGTGCAAGATATCTtgaacacaaaaaaatttggggATATTGCATTTAGAGACAAGGATTTCAGAAATGCAATCGAGTATTATTCTAAGTTAGTAGTTATGATGTCAGTTCCTTCGGCTACTGTTTTCGCAAGGAGAGCCTTCTCCTACTTGATGAATGACCAGGCAGAACTTGCCTTGAGGGACGCAATGCAGGCTCAGGTATGCATACCTGATTGGCCAACTGCATTTTATCTGCAGGCACTTGCACTCTCCAAGCTGGGAATGGAAACTGATGCACAGGACATGCTTCATGATGGGCATGCCTTTGAAGCAAAAAGATCTAACAGCTGGCGTGGTTA 1484 0.4333 MGCLHSKTAHLHSLDEPSDLLDSKKPDPAHGDDLDQECQVPAFKEYDLTELRRATNEFSTDYIVSESGERAPNVVYRGKLENNRLVAVKRFSKQSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAHHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIKGKNALLLMDSSLEGQYANDDATNLVDLASKCLQIEARERPDIKFLLSAVAPLQKQKEVASYVLMGISKNTPVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFRNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLHDGHAFEAKRSNSWRG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01882 494 MobiDBLite consensus disorder prediction 14 36 - -
Bva11g01882 494 Gene3D Phosphorylase Kinase; domain 1 33 136 - -
Bva11g01882 494 SUPERFAMILY TPR-like 385 482 IPR011990 GO:0005515
Bva11g01882 494 ProSiteProfiles Protein kinase domain profile. 61 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01882 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 493 IPR045845 GO:0004672|GO:0009742
Bva11g01882 494 SUPERFAMILY Protein kinase-like (PK-like) 45 312 IPR011009 -
Bva11g01882 494 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Bva11g01882 494 Gene3D Tetratricopeptide repeat domain 384 492 IPR011990 GO:0005515
Bva11g01882 494 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 493 - -
Bva11g01882 494 Pfam Protein tyrosine and serine/threonine kinase 74 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01882 Bva-Chr11 16326077 16331890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01882 42 315 Glycoside Hydrolase AT3G07070 34.007 3.69e-40 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva11g01882 PK_Tyr_Ser-Thr 8.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01882 K14500 - gmx:100793576 931.784