Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01881 ATGAGTGAGATTAAGATTGAGATCATATCTAGAAACTGCATCAAGCCCTCAACACCCACACCTCCCTACCTTGAAACCTTCAGACTCTCCCTTTTAGACCAGCTCTCCCCTAATATCCATGGCAACTCCACCTTCTTCTACCCATACAACTCCACCAACGACCCCATCTCAGAATTCTCAACAAGATCCAAACTTCTTCGAAAATCCCTCTCCGAAACTTTGACCCGTTTCTACCCCCTCGCTGGCCGCCTCCAAGATGCCTCAACCATTGGCTGCAACGACGACGGCGCCTTCTTCATTGAAGCTCGAACCGACAGCCCTCTCTCCGACATCCTCGGCAGTCCAGATTTCAATCGCATTCAACACTTGCTTCCCACCTCTGACAAGGAAACCGTGGAAATATCGAATGGTTCTATGTTGCTTGTCCAGTTCACGTTGTTCGGTTGTGGTGGGACCACCGTGACCATATCTCTCACGCACAAGATCGCCGACATAGCCGCGTTCATTGCTCTCATTCAGAGCTGGACCGCTGCATGTCGCGGAGTTGCCGAAGTGGCGGTTCCTGAATTAGATATCGGCGGTTCTCTCTTCCcgcaaagagagattttgggcATGTCAGCTTCCGTCCATATCGCCGCCGAAAAGTTCAAGGCGAGAAGGTTCATTTTCAGCGAATTCAAAGTGGGAGAACTGAGAAGCAGAATTATAAGCGCACTTGGAAAAGAGGCCGAGTTCAAACCCTCACGGGTGGAGGTGGTGCTGGCCCTCATTTGGAGGTGCgctatttcttcttctcgTTCCAAAACGGGGTCGTTTAAGCCATCGGCTTTATTCCAAGCTGTGAATCTGCGTCCCCGAATGGACCCACCGGTCCCGGACAGCGCCCTCGGCAACTTTGTGTGGCCGTTTGCCGTGATGGCCGAGGAGGAAGGAGACTTGGAATTGCAAGAGTTagtgaagaaaatgagaaagtcCATGAAGGAGTTCCTCGAGAAGAAAGTAAACAAGTTCAAAGGGGATGGTTTTGGAGCTGTGATGGAAGCCTTGAAGGAGAGAGGAGAGCTGTTTAAGAAGAACAAGGATATCTTGGTTTACAAGTGTTCAAGTTGGTGTAAATTTGCATTGCTGGAGTTCGACTTTGGGTGGGGAAACAATGTGTGGATGACAAGTGTAAATAATCTGGTGAGTAATACCATTGCTTTGATGGATACCCAAGATGGAGGAGTTGAAGTTCTCGTGACTCTGGACGAACAAGAAATGGATATATTCGAACAACATCAAGAGCTTCTGCAATATGCTCTGCGTAATCCtagtattataatttg 1325 0.4657 MSEIKIEIISRNCIKPSTPTPPYLETFRLSLLDQLSPNIHGNSTFFYPYNSTNDPISEFSTRSKLLRKSLSETLTRFYPLAGRLQDASTIGCNDDGAFFIEARTDSPLSDILGSPDFNRIQHLLPTSDKETVEISNGSMLLVQFTLFGCGGTTVTISLTHKIADIAAFIALIQSWTAACRGVAEVAVPELDIGGSLFPQREILGMSASVHIAAEKFKARRFIFSEFKVGELRSRIISALGKEAEFKPSRVEVVLALIWRCAISSSRSKTGSFKPSALFQAVNLRPRMDPPVPDSALGNFVWPFAVMAEEEGDLELQELVKKMRKSMKEFLEKKVNKFKGDGFGAVMEALKERGELFKKNKDILVYKCSSWCKFALLEFDFGWGNNVWMTSVNNLVSNTIALMDTQDGGVEVLVTLDEQEMDIFEQHQELLQYALRNPSIII 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01881 441 Gene3D - 3 206 IPR023213 -
Bva11g01881 441 Pfam Transferase family 5 429 - -
Bva11g01881 441 PANTHER F21J9.9 3 441 - -
Bva11g01881 441 PANTHER VINORINE SYNTHASE-RELATED 3 441 - -
Bva11g01881 441 Gene3D - 213 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01881 Bva-Chr11 16323597 16325156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01881 4 425 Monolignol Biosynthesis Gene Families AT5G48930 24.396 4.10e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01881 - - jre:108994055 568.926