Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01879 ATGGGAAGCGGACTTTCCACCCTTCTTTCTTGCTGCAAACCGGCTAACCGGGCGACCAACCAACCGGAGCAACAGGAGGTGATCTTTGCCGCCACAGAGCCATTGGACGAAACCCTAGGCCATTCCTTCTGTTACGTCAGATCTTCTGCTCGCTTTATTTCACCCACTCCCTCGGATCGCTTTGTCTCCCCTTCCAACTCCCTTCGCTTTTCTCCCCCGCACGAACCCGTTCACAGGACCCGACCCGAAGTACCCGAAACCGGTTTCAAGGCCATTTCCGGAGCTTCGGTCAGTGCCAACACTACCACTCCCAGAACTGTTCTCCAGCTAGATAATATCTACGATGATGCTACCGACAGTATCCTTGGAGGTGCTGGTGGTGGTGGGGTGAGAGCAAGTATTGTCAATGGGTTCGAAAGCTCATCGTCGTTTAATGCTATCCCGCTTCAGCCGGCGTTGAGAGGGGGTGACTCCTCAGGTCTGGTGGAAAGGGGCGGTTTCTTTCTCTCAGGCCCAATTGAGAGCGGTGCTCTCTCCGGGCCTCTCGACGTAAACGCCATGACAGAAAGTGGAAGCGGGGTCCCTTTCTCTGCGCCTCTTGGTGGCATTCATGTAAAAAAGAAGCGGAAGGGCATTCCGAAGTTTCGGAAGGCATTCCATAGGAACCGCTCGGAGAAGAAGCGACCGTGGGTCGTGCCGGTGTTAAATTTCGTTGGTAGAAAAGAAGTTTCAGCGAACGAAGAGAAGGCAGAGGTGAAGGCTAACGATGATGTACAGTGGGCACTTGGCAAGGCCGGAGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAGGGGTGGTTGTTTGTTGGGATTTACGACGGCTTTAATGGCCCTGACGCGCCAGAATTTTTGATGGGTAATCTTTACCGTGCTGTTCTCAATGAGCTTCGGGGTTTATTTTGGGAAGTTGAAGAGGCAGAAGAAAATAACCCACCAGGTGTAGCTGCAGAGAATGCAACACTGGGAGAGGAAACTGAACCGTCAATGGTGACATCCTGCCGATACTTCAAAAATGAGGGGGATGTTTCTGTGAGTGCAGAAAAGTCGAATCTTATGCCGATTGATCCAGGATCAGCTAAGAAAGTAACGTTCCAAGCAGAGGGAACGGAAAGTAGGAGGCGTAGGCTCTGGGAATTTCTTGCTGAAGATGATCCTGAAGACGGCCTTGATCTTTCAGGTTCAGTTAGATTTGCATTTTCTGTCGATGATGCACTTAGCGTGGGCAATGCGGGCTCAGCAGTCAGTAGACGGTGGCTGTTGTTGTCGAAATTGAAGCACGGACTATCGAAGCACAGCGAGGCTCACGTTAGAAAGCTGTTTCCATGGAGCCTTGGCACGGATGATAAAGAGAAGGTTGAGGTAGAAAATCGAGCAGAAGAGAAGTCTACGCGAGGTGGTAGGAAGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTTTTGAGAGCATTGTCTCGGGCACTCGAAGTTACCGAGCTTGCATATTTAGATATGACGGATAAGGTTCTTGATACAAACCCGGAGCTCGCTTTAATGGGGTCATGTGTGTTAGTTGTTTTAATGAGGGATGAAAATGTGTACGTGATGAACGTGGGCGATAGCCGAGCCATTGTTGCACAATATGAGCTCAAAGACGTTAATTCCAGTATGGAACTAGGGAGTAAGGGAGATAATGGGTCTAACGTAGAGAGCATAGTTGAGGAGTCCTCAGCTCCGGGTGAAACAGCAATCAAGTTGGGGAATGAGGGTCCTGCTCAGGAAATGAGTCTGGTGGCATTACAGCTGTCCACTGACCATAGCACGAGCATTGAAGAaGAAGTAATTCGAATAAAGAATGAACATCCTGATGATAGCCAATGTATCGCCAATGATAGAGTAAAAGGTCGTCTTAATGTCACCAGAGCATTTGGAGCAGGATTTCTAAAACAGCCAAAGTGGAACAACGCATTACTAGAAGTGTTCCGTGATGAATATATTGGCACTGCTCCTTATATATCCTGCCGTCCGTCGCTACGCCATCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGCTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTCAAATCTTCATGGAAAAGTTTCCAGATGGAGATCCTGCTCAACATTTGATAGAGGAGCTGCTCCTCCGTGCAGCCAAGAAAGCTGGAATGGAGTTCCATGAATTGCTGGATATCCCGCAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGGATCTGGAAGTCATCAGGGAAGTATCTCTG 2357 0.4879 MGSGLSTLLSCCKPANRATNQPEQQEVIFAATEPLDETLGHSFCYVRSSARFISPTPSDRFVSPSNSLRFSPPHEPVHRTRPEVPETGFKAISGASVSANTTTPRTVLQLDNIYDDATDSILGGAGGGGVRASIVNGFESSSSFNAIPLQPALRGGDSSGLVERGGFFLSGPIESGALSGPLDVNAMTESGSGVPFSAPLGGIHVKKKRKGIPKFRKAFHRNRSEKKRPWVVPVLNFVGRKEVSANEEKAEVKANDDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVLNELRGLFWEVEEAEENNPPGVAAENATLGEETEPSMVTSCRYFKNEGDVSVSAEKSNLMPIDPGSAKKVTFQAEGTESRRRRLWEFLAEDDPEDGLDLSGSVRFAFSVDDALSVGNAGSAVSRRWLLLSKLKHGLSKHSEAHVRKLFPWSLGTDDKEKVEVENRAEEKSTRGGRKRKVGPVDHDSVLRALSRALEVTELAYLDMTDKVLDTNPELALMGSCVLVVLMRDENVYVMNVGDSRAIVAQYELKDVNSSMELGSKGDNGSNVESIVEESSAPGETAIKLGNEGPAQEMSLVALQLSTDHSTSIEEEVIRIKNEHPDDSQCIANDRVKGRLNVTRAFGAGFLKQPKWNNALLEVFRDEYIGTAPYISCRPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVQIFMEKFPDGDPAQHLIEELLLRAAKKAGMEFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01879 785 Gene3D - 405 780 IPR036457 -
Bva11g01879 785 Gene3D - 238 388 IPR036457 -
Bva11g01879 785 SUPERFAMILY PP2C-like 263 774 IPR036457 -
Bva11g01879 785 CDD PP2Cc 489 773 IPR001932 -
Bva11g01879 785 PANTHER PROTEIN PHOSPHATASE 2C 20 783 IPR015655 GO:0004722|GO:0006470
Bva11g01879 785 Coils Coil 303 323 - -
Bva11g01879 785 MobiDBLite consensus disorder prediction 63 82 - -
Bva11g01879 785 Pfam Protein phosphatase 2C 607 737 IPR001932 -
Bva11g01879 785 Pfam Protein phosphatase 2C 500 553 IPR001932 -
Bva11g01879 785 ProSiteProfiles PPM-type phosphatase domain profile. 251 773 IPR001932 -
Bva11g01879 785 PANTHER PROTEIN PHOSPHATASE 2C 29 20 783 - -
Bva11g01879 785 SMART PP2C_4 251 771 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01879 Bva-Chr11 16311295 16316598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01879 1 785 PP2C-type Phosphatase Gene Family AT2G35350 57.767 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01879 - - jre:108994087 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00437 08 2243587 2250299 Bva11g01879 11 16311295 16316598 BWGD
Bva11g01879 11 16311295 16316598 Bva11g01879 11 16311295 16316598 ECH