Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01877 ATGGTAGGGGCATCACTGCCGCCAGGTTTTCGTTTCCACCCAACTGATGAAGAATTGGTGGGATATTACCTGAAGAGAAAAGTGGAGGGTCTCCAAATAGAGCTTGAAATTATACCCGTAATTGATTTGTACAAGTTCGATCCGTGGGAGTTGCCGGAGAAATCATTCCTACCAAGTCGAGATTCTGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGCTCACGAACAAACAGAGCTACCAAAGCTGGCTACTGGAAAGCCACAGGAAAAGACAGGAAGATCGTTTGTCAAACCACCCCTTCCACGGTGACAGCCACAGGGTACAGGAAAACACTGGTTTTCTACCGTGGGCGAGCCCCTTTTGGGGATAGAACAGACTGGGTTATGCATGAGTATCGCCTTTGCGATGATCTTAGCCAAGGACCACCGAGTTTTCAGGGTGGTTTTGCTCTGTGCCgagttattaaaagaaatgagaaggcAAATGATTCTCAGGGAGAGCATAAGGGTAAAGGGGCTCCAACCAATGGGGATCACACTTCAATGAGAGTCTCCAACGAGCCCTTGAGCATCTCTCGTGATGTTTCTTCTGAGGCAGGTCACATGAATCTTGAGAGTCGTTATTCAAGCCCAATAACTTCTCCATACAATGTGGCTCCAGTTgcagagtttgagaccaatccTGCAAACATCTGGGTCTCCCctgattttattattgattctTCAAAGGACTTCCCTCAAGTACAAGAGTCTGAATACTTTCCACAGTGTGGCTTTACAATCTCCACAGCACCATGGCAGTCATTCGAACACACAGAAATTTCACCCAGTTCATCttactcaaattttaacaGGGAAATGGAATTTGGTGATGATTTCAGTCGAATTGGCTGCATGGCACCTTACTCGGGACAAGGAAACTTCATGGACTTTTATGGAAATGAGGATGTGCCTTACGAAGGTTATGACCAAATCAATTCAATCAGATATCCAAAAGCTctctg 1016 0.4262 MVGASLPPGFRFHPTDEELVGYYLKRKVEGLQIELEIIPVIDLYKFDPWELPEKSFLPSRDSEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIVCQTTPSTVTATGYRKTLVFYRGRAPFGDRTDWVMHEYRLCDDLSQGPPSFQGGFALCRVIKRNEKANDSQGEHKGKGAPTNGDHTSMRVSNEPLSISRDVSSEAGHMNLESRYSSPITSPYNVAPVAEFETNPANIWVSPDFIIDSSKDFPQVQESEYFPQCGFTISTAPWQSFEHTEISPSSSYSNFNREMEFGDDFSRIGCMAPYSGQGNFMDFYGNEDVPYEGYDQINSIRYPKAL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01877 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 336 - -
Bva11g01877 338 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Bva11g01877 338 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bva11g01877 338 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Bva11g01877 338 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Bva11g01877 338 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 336 - -
Bva11g01877 338 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01877 Bva-Chr11 16301994 16304649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01877 1 292 NAC Transcription Factor Family AT4G17980 55.405 2.03e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g01877 NAM 3.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01877 - - gmx:100792714 521.161