Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01873 ATGGCTGAGAAATCCACAAGACCTGAGGTGGGCCCAAAAGTGTTTGCCAAGAATGCCACCCAGCCAAACTTGACTGTATTCGTATGGGACATGGATGAGACCCTTATACTACTGAATTCGTTGTTAAGGGAAACATTTGCTGAATCTTTTAATGGTCTGAAGGATGTTCACAAGGGTTTAGAGATAGGGAGGTCGTGGGAAAAGCTCATTCTACAAATATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAATAAGCCATTTCTTGATGTTGTCAGCCAATATGATGATGGGCAGGACCTTTCTAATTATGACTTCAGCGCAGATGTATTTGGTCCACCACATGATGATACCAACAATAGAAAACTTGCATATAGACATCGAGCCATAGCACAAAAGTACATACAGGGTTTACAGAATATTTTAGATCAGGAGACATTAAAACACTGGAATGAATTGTACGATACCACTGATGAATATACTGATAAATGGCTTTCCTCTGCACGGGCCATTTTGAAGGACTGTTCAGCTGAAAATACAGATCTAGTTTCTTCTGTTGCCTCTGCTGTCACAAGCACTGGCTCAACTACTGCAAAGTCTCAGAATGTAAATGTTTTAGTGACTTCTGGATCGTTGATACCCAGCCTTGTAAAATGTTTACTCTTTCGTCTCGACAGTTGGATAACGCATGGAAATGTTTATAGCTCGTGGGAAGTGGGAAAAACTCAATGTTTCCGATGGATCAAAGAGCGTTTCAGCAATCCAAATGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTGAAGCCGCAAAAATCATGGGATGGCCATTTGTTAAGATTGATCCACGGCCCGGCAAAGTTCACAGGTTCCCTGGGCTCACATTGAGAACACTAAACCACTATATTTCTGTGGTGTATGGAAATCCAAATGAggagaaagatgaagaata 962 0.4002 MAEKSTRPEVGPKVFAKNATQPNLTVFVWDMDETLILLNSLLRETFAESFNGLKDVHKGLEIGRSWEKLILQICDDYFFYEQIENYNKPFLDVVSQYDDGQDLSNYDFSADVFGPPHDDTNNRKLAYRHRAIAQKYIQGLQNILDQETLKHWNELYDTTDEYTDKWLSSARAILKDCSAENTDLVSSVASAVTSTGSTTAKSQNVNVLVTSGSLIPSLVKCLLFRLDSWITHGNVYSSWEVGKTQCFRWIKERFSNPNVRFCVIGDGWEECEAAKIMGWPFVKIDPRPGKVHRFPGLTLRTLNHYISVVYGNPNEEKDEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01873 320 Gene3D - 25 294 IPR038102 -
Bva11g01873 320 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 16 312 - -
Bva11g01873 320 PANTHER EYES ABSENT 16 312 IPR028472 GO:0004725
Bva11g01873 320 TIGRFAM EYA-cons_domain: EYA conserved domain 25 302 IPR006545 GO:0007275
Bva11g01873 320 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 24 285 - -
Bva11g01873 320 SFLD Haloacid Dehalogenase 24 285 - -
Bva11g01873 320 SUPERFAMILY HAD-like 23 292 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01873 Bva-Chr11 16287519 16290243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01873 24 320 Protein tyrosine phosphatase (PTP) family AT2G35320 59.596 2.61e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01873 - - gmx:100799315 489.574