Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01868 ATGGATTCTCGTGAACCGCCCCAGCAACCGCCACCGCTACAACAGCAACCACAGCCGCAGTCACAACCACAACCGCCATCAGTGGCCCCAAACATGATTATAGGACCCGGGTCGTATGCCCCTACTATGCCCAACCCCAATAGTTCTCCTATGATCAACCCCAATTCAACGGCCACTATGATGGCCCCTGCTACCGCTCGATTCCCTTTCAATTCAGGAGTTCCGCAACCCCCTCCTCAAACAAAGCCTCCGGAACTTCTTAACTCCACCAGTCCTTACGATGCCTCTTCTGCGTTGAGGCCATGTGGCTTTAGCATTGATTCTgcgaagaagaagagaggccGGCCGCGGAAATATTCGCCGGATGGTAACATTGATTTGGGTTTGGCTCCCACGCCTATGTCTTCTTCTGCCGGTCAGGGCGATTCCAGTGGCACGCCGTCTACGGAACCTCCGGCAAAGAAAAATAGGGGAAGGCCGCCGGGCTCTGGAAAGAAGCAGTTGGATGCTCTTGGAGCTGGCGGTGTTGGGTTTACTCCGCATGTAATCATGGTGAATGCTGGCGAGGACATCGCATCAAAGATTTTTGCCTTTTCTCAGCAAGGACCTCGGACAGTTTGTATTCTTTCTGCCAATGGTGCTATCTGCAATGTCACCCTTCGTCAGCCAGCAATGTCTGGTGGTACTGTGACATATGAGGGCCGATTCGAGATTATATCTCTGTCAGGTTCATTCCTGCTTTCTGAAAATAATGGTGGTCGTAGCAGAATAGGTGGTTTGAGTGTGTCTCTTGCAGGGTCCGATGGACGAGTTTTGGGTGGTGGAGTTGCTGGAATGCTAACTGCAGCATCACCCGTGCAGGTCATCGTGGGTAGCTTTATTGCGGATGGGAAAAAGTCGAGTGCAAACGTCATGAAATCTGTCGCTTCGTCGGCAGCGGCATCccaaatgttaaattttggtGCACCTACGACACCAACCAGTCCTACCTCCCAAGGGCCTTCAACTGAGTCGTCCGATGATAATGGTGATAGTCCTTTCAATAGAGGTGGCCATCCTGGACTCTACGGTAATGCTGGTCAGCCTATTCATAATATGCCAATGTACCACCATCAACTGTGGGCAGGCCAAACACCGCagtg 1142 0.5026 MDSREPPQQPPPLQQQPQPQSQPQPPSVAPNMIIGPGSYAPTMPNPNSSPMINPNSTATMMAPATARFPFNSGVPQPPPQTKPPELLNSTSPYDASSALRPCGFSIDSAKKKRGRPRKYSPDGNIDLGLAPTPMSSSAGQGDSSGTPSTEPPAKKNRGRPPGSGKKQLDALGAGGVGFTPHVIMVNAGEDIASKIFAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRFEIISLSGSFLLSENNGGRSRIGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSSANVMKSVASSAAASQMLNFGAPTTPTSPTSQGPSTESSDDNGDSPFNRGGHPGLYGNAGQPIHNMPMYHHQLWAGQTPQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01868 380 MobiDBLite consensus disorder prediction 1 30 - -
Bva11g01868 380 Pfam Plants and Prokaryotes Conserved (PCC) domain 180 293 IPR005175 -
Bva11g01868 380 SUPERFAMILY AF0104/ALDC/Ptd012-like 178 294 - -
Bva11g01868 380 MobiDBLite consensus disorder prediction 1 171 - -
Bva11g01868 380 ProSiteProfiles PPC domain profile profile. 174 314 IPR005175 -
Bva11g01868 380 SMART AT_hook_2 154 166 IPR017956 GO:0003677
Bva11g01868 380 SMART AT_hook_2 110 122 IPR017956 GO:0003677
Bva11g01868 380 CDD DUF296 179 293 IPR005175 -
Bva11g01868 380 MobiDBLite consensus disorder prediction 319 362 - -
Bva11g01868 380 MobiDBLite consensus disorder prediction 130 151 - -
Bva11g01868 380 MobiDBLite consensus disorder prediction 319 345 - -
Bva11g01868 380 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 106 375 IPR039605 GO:0003680
Bva11g01868 380 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 106 375 - -
Bva11g01868 380 MobiDBLite consensus disorder prediction 41 62 - -
Bva11g01868 380 Gene3D - 180 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01868 Bva-Chr11 16265066 16269012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01868 104 380 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 53.312 1.04e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01868 - - zju:107430497 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00450 08 2299887 2304650 Bva11g01868 11 16265066 16269012 BWGD