Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01859 ATGGAAATTTCATCCGCCAGTTATAACTGCTTCCCTCATCTGCAGGGAATGGAAGAATCCAATGATATTTTTGGAGACGAGTACTACCAGTACGAAATGGATTCGTTAATGGGAATGGGATACCCGGTAGTACCTGCTGATGAAATTGAGTTAGCGTCGTCTTTATCAGGATCTGGGGACAGCTATTCCTCTTATACATGTCTCAACTCCAAACGCAGCAGCCTTGAAAGTCCAGATCAATCAGTTGCCCCAAGGCCAAGACCAACCAAACAGCTCAAGACCTCCAACTCATCTTGGGTCGCTGGTCAATTAATGCCCCCCAAGCTGCCTAACGCTGCTAATTCTAATAATTCTAGAATTATCTCTTTCGGAAACAACACAAATGTTTCATCATCTCTGCCTCACGAGTTTGACAACCTCCCTGTCGATAAGCGCAATCCTAAAATCGAGATTGGCACCGAACTCTACAACCAAAACCTGGATTTTTCATCATTGCTTGAATATGACACACCAACCACTAAACCTACGACAACTGTCACCAGAAATTCAGCCCAAACTCAAGATCATGTAATGGCCGAACGAAAACGAAGGGAAAAGCTCAGCCAGATGTTCATAGCTCTCTCCGCCATTCTTCCTGGCCTCAAGAAGATGGACAAGGCTTCTGTGCTCGGACATGCTATCAAGTATGTTGAAAACCTTCAGGTACGAGTGAAGAGTCTGGAGGATCAAGTAGCCAAGAAAACTGTGGAATCTGCAGTTTATGTGAACAGATCTCTTCTCTCTACCGACGACGCTACAACTGGTACCTCATCATCCCAAGGAAACTACGACCAGTCACTCCCTGAAATTGAAGCTAGAGTTTCCGGTAAAGACGTGCTCATTAGGATTCACTGCGAGAAACCCGTAACCTGTGTGTCTATGGTGCTCGGCCAATTACAGAAACTTCATCTCACTGTTCAAAGTAGCAGCTTTTTACCCTTTGGGACTACCACTATTCACATAACCATTGTTGCTCGGATGGACGAAGAACACTGCATCACAGCGAAGGAGCTTGTAAAAAGCCTGAGGCAGAGTTTGATCCGATCATCTGACAGTGAATA 1100 0.4509 MEISSASYNCFPHLGMEESNDIFGDEYYQYEMDSLMGMGYPVVPADEIELASSLSGSGDSYSSYTCLNSKRSSLESPDQSVAPRPRPTKQLKTSNSSWVAGQLMPPKLPNAANSNNSRIISFGNNTNVSSSLPHEFDNLPVDKRNPKIEIGTELYNQNLDFSSLLEYDTPTTKPTTTVTRNSAQTQDHVMAERKRREKLSQMFIALSAILPGLKKMDKASVLGHAIKYVENLQVRVKSLEDQVAKKTVESAVYVNRSLLSTDDATTGTSSSQGNYDQSLPEIEARVSGKDVLIRIHCEKPVTCVSMVLGQLQKLHLTVQSSSFLPFGTTTIHITIVARMDEEHCITAKELVKSLRQSLIRSSDSE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01859 365 PANTHER TRANSCRIPTION FACTOR NAI1 60 360 - -
Bva11g01859 365 SMART finulus 189 238 IPR011598 GO:0046983
Bva11g01859 365 MobiDBLite consensus disorder prediction 86 101 - -
Bva11g01859 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Bva11g01859 365 MobiDBLite consensus disorder prediction 69 101 - -
Bva11g01859 365 PANTHER BHLH TRANSCRIPTION FACTOR 60 360 - -
Bva11g01859 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 248 IPR036638 GO:0046983
Bva11g01859 365 Coils Coil 229 249 - -
Bva11g01859 365 Pfam Helix-loop-helix DNA-binding domain 186 233 IPR011598 GO:0046983
Bva11g01859 365 Gene3D - 175 247 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01859 Bva-Chr11 16215911 16217918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01859 86 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.155 7.13e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g01859 HLH 6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01859 - - gmx:100798011 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00459 08 2360369 2362211 Bva11g01859 11 16215911 16217918 BWGD
Bva11g01859 11 16215911 16217918 Bva11g01859 11 16215911 16217918 ECH