Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01858 ATGCGGCTGATTCTCttgcttctccttcttctccaCTTCCACCACACTCTCTCTGCAACCGCGCGTGTGTCGGAGTACCGTGCGTTGCTTTCTCTCAAGGCTGCCATTACCGACGACCCCCAATCTGCTCTTTCCACGTGGAACACCTCTACCAGCCACTGCACTTGGACCGGCGTCGCCTGCGATTCCCGCCGACACGTTACCGCCCTTAACCTTACCGGGCTTAACCTTGACGGTATACTTTCCAATGATATAGCTCGCCTCCCACTCCTCTCTAACCTCTCCATTGCCGATAATCAGTTCTCTGGACCCATCCCCCCAGAGATCTCCACCATCACTGCTCTCCGATTCCTTAATCTTTCTAACAATGTATTTAATGGCACTTTCCCTTCCGAGCTCTCCCAGCTCAAGAATCTCCAGGTCCTCGACTTGTATAACAACAACCTGACTGGTGACCTCCCTCTCGCCGTCGCCCAGATGCCGAATCTACGGCATTTGCATCTCGGAGGTAACTTTTTCTCGGGTAAGATCCCGCCGGAGTATGGACAATGGCAACATTTGGAATACTTGGCTGTTTCCGGCAACGAGCTGAACGGCACTATACCGCCGGAGATCGGGAACTTGACCAGCCTCAGAGAACTCTATCTTGGATACTACAACACTTATGAGAATGGTATTCCACCGGAGATTGGCAACTTGTCGGCATTAGTGAGGCTTGACGCGGCCAACTGTGGATTGACCGGAGAGATACCACCGGAACTCGGGAAGCTTCAAAATCTTGATACTCTATTTCTACAAGTGAACGCACTATCAGGGTCTTTGACGCCTGAGCTGGGGAAGCTAAAGACCCTGAAGTCCATCGATTTATCCAACAATATGCTTGCAGGTGAGATTCCGGAGACTTTTGCTGAGCTCAAGAACCTGACCCTTTTGAACCTGTTCCGAAATAAGCTTCACGGAGCGATTCCTGAGTTCATTGGTGAGATGCCATCTCTGGAGGTGCTGCAGCTTTGGGAGAACAACTTCACTGGGAGCATTCCTCAGGGTTTGGGGAAGAATGGGAGGCTGGTATCTGTTGATCTTTCTTCAAACAAATTGACTGGGACTCTGCCTCCTGACATGTGCTCTGGGAATCACCTTCAGACTTTGATAACTCTGGGTAATTTCTTATTTGGTCCTATTCCTGTATCCCTTGGGAGGTGCGAGTCGCTAACTCGGGTTCGTATGGGAGAAAACTTTCTGAATGGGTCAATTCCGAAAGGCCTCTTTGGGCTTCCCAAACTTACTCAGGTGGAGCTGCAGAACAATCTTCTGTCAGGGCAGTTTCCAGAGGCGGGTTCGATCTCTGTTAATCTTGGTCAGGTTAGTCTATCCAACAACCAGCTCTCTGGGCTGTTGCCGCCCACAATTGGTAACTTTTCCGGCATGCAGAAGCTCCTTCTTGATGGCAATAAGTTCTCAGGACCAATCCCTCCTGAGATTGGGAGATTACAGCAACTTTCAAAGATAGATTTTAGCCACAATCAGTTTTCAGGCCCTATTGCGCCGGAAATTAGTCAATGCAAGTTGTTGACTTTCGTTGATCTTAGTCGTAATGAGCTTTCTGGTGAGATTCCAAATAAGATCACAGCTATGCGGATATTGAATTACCTGAATCTTTCGAGAAATCATCTAGTTGGCAGTATTCCGGCATCAATATCAAGCATGCAAAGTTTAACTTCTGTTGATTTTTCATACAACAATCTCTCTGGTTTGGTTCCTGGCACTGGCCAATTCAGCTACTTCAACTACACATCTTTTCTGGGCAACCCTGACCTATGTGGACCGTACTTGGGTCCTTGTAAGGATGGGGTTGTCAATGGTGGCCACCAATCACATGCTAAGGGTCCACTCTCTGGTTCTCTGAAGCTCCTGCTGGTTCTTGGGTTTCTTCTATTTTCGATTGCATTTGCAGTCGTAGCAATAATTAAAGCACGCTCATCGAAGAAGGCCAGTGAATCCCGTGCATGGAAATTGACTGCATTCCAACGTTTAGACTTCGCTGTTGATGATGTTTTGGACTGCTTGAAGGAGGACAACATAATAGGGAAAGGAGGTGCAGGTATTGTCTACAAGGGGGCAATGCCAAATGGAGTTCAGGTTGCCGTGAAAAGGTTACCAGCCATGAGCAGAGGCTCTTCCCATGATCATGGGTTCAATGCTGAAATCCAGACTTTAGGGAGGATCCGACATAGGCACATTGTTAGATTACTTGGGTTCTGTTCCAACCATGAAACAAATCTTCTAGTCTATGAATACATGCCAAACGGAAGCTTGGGTGAGGTTCTTCATGGTAAGAAAGGGGGTCATTTACATTGGGATACAAGGTATAAAATTGCCGTGGAGGCTGCTAAGGGGCTTTGCTATTTACACCATGACTGTTCGCCGCTAATCGTTCATCGAGATGTAAAATCAAACAACATCCTTCTTGACTCCAGTTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCCGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACACTTAAAGTTGACGAGAAAAGTGATGTTTACAGCTTTGGCGTGGTTCTTTTAGAGCTTATTACAGGGAGGAAACCAGTTGGAGAATTTGGTGACGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAACAAGGAAAGAGCACTAGAAGTCCTTGATCTTAGACTTTCCTCAGTTCCCCTTCAAGAAGTGATGCATGTCTTTTATGTCGCCATGCTTTGCGTTGAAGAACAGGCTGTAGAGCGACCAACCATGCGCGAAGTTGTTCAAATTCTAACCGAGTTTCCAAAGCCGCCTGATTCCAAACAGGGGGACATAACCGTGACGGAGTCCTCTGCGTCACCAGCAAACGCTTTAGAGTCTCCGGCGGCAGCGTCCAAAGAAGTTAAAGATAATCAACATCCTTCTCAATCACCACCACCCGATCTGCTTAGCATTTG 3044 0.4714 MRLILLLLLLLHFHHTLSATARVSEYRALLSLKAAITDDPQSALSTWNTSTSHCTWTGVACDSRRHVTALNLTGLNLDGILSNDIARLPLLSNLSIADNQFSGPIPPEISTITALRFLNLSNNVFNGTFPSELSQLKNLQVLDLYNNNLTGDLPLAVAQMPNLRHLHLGGNFFSGKIPPEYGQWQHLEYLAVSGNELNGTIPPEIGNLTSLRELYLGYYNTYENGIPPEIGNLSALVRLDAANCGLTGEIPPELGKLQNLDTLFLQVNALSGSLTPELGKLKTLKSIDLSNNMLAGEIPETFAELKNLTLLNLFRNKLHGAIPEFIGEMPSLEVLQLWENNFTGSIPQGLGKNGRLVSVDLSSNKLTGTLPPDMCSGNHLQTLITLGNFLFGPIPVSLGRCESLTRVRMGENFLNGSIPKGLFGLPKLTQVELQNNLLSGQFPEAGSISVNLGQVSLSNNQLSGLLPPTIGNFSGMQKLLLDGNKFSGPIPPEIGRLQQLSKIDFSHNQFSGPIAPEISQCKLLTFVDLSRNELSGEIPNKITAMRILNYLNLSRNHLVGSIPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVVNGGHQSHAKGPLSGSLKLLLVLGFLLFSIAFAVVAIIKARSSKKASESRAWKLTAFQRLDFAVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGVQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKERALEVLDLRLSSVPLQEVMHVFYVAMLCVEEQAVERPTMREVVQILTEFPKPPDSKQGDITVTESSASPANALESPAAASKEVKDNQHPSQSPPPDLLSI 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01858 1014 SUPERFAMILY Protein kinase-like (PK-like) 683 960 IPR011009 -
Bva11g01858 1014 SMART LRR_typ_2 136 159 IPR003591 -
Bva11g01858 1014 SMART LRR_typ_2 257 281 IPR003591 -
Bva11g01858 1014 SMART LRR_typ_2 354 377 IPR003591 -
Bva11g01858 1014 SMART LRR_typ_2 329 353 IPR003591 -
Bva11g01858 1014 SMART LRR_typ_2 497 521 IPR003591 -
Bva11g01858 1014 SMART LRR_typ_2 569 592 IPR003591 -
Bva11g01858 1014 SMART LRR_typ_2 160 184 IPR003591 -
Bva11g01858 1014 Gene3D Ribonuclease Inhibitor 222 373 IPR032675 -
Bva11g01858 1014 MobiDBLite consensus disorder prediction 972 987 - -
Bva11g01858 1014 Pfam Leucine Rich repeats (2 copies) 137 177 IPR025875 -
Bva11g01858 1014 SUPERFAMILY L domain-like 298 614 - -
Bva11g01858 1014 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Bva11g01858 1014 SMART serkin_6 689 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01858 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Bva11g01858 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1001 - -
Bva11g01858 1014 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Bva11g01858 1014 Gene3D Transferase(Phosphotransferase) domain 1 767 979 - -
Bva11g01858 1014 SUPERFAMILY RNI-like 70 391 - -
Bva11g01858 1014 MobiDBLite consensus disorder prediction 964 1014 - -
Bva11g01858 1014 Gene3D Ribonuclease Inhibitor 374 615 IPR032675 -
Bva11g01858 1014 Gene3D Ribonuclease Inhibitor 22 221 IPR032675 -
Bva11g01858 1014 ProSiteProfiles Protein kinase domain profile. 689 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01858 1014 MobiDBLite consensus disorder prediction 998 1014 - -
Bva11g01858 1014 Gene3D Phosphorylase Kinase; domain 1 653 766 - -
Bva11g01858 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01858 Bva-Chr11 16203147 16207466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01858 12 990 Receptor kinase-like Gene Family AT5G65700 81.947 0.0 1632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva11g01858 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01858 - - gmx:547593 1686.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00464 08 2383240 2387122 Bva11g01858 11 16203147 16207466 BWGD