Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01857 ATGCCCCAACTCATTCTCAACCCCTTGTCCTTTTTACTACTATCTTTACTCTGTTTCCGTCGTTTATCGCCGGTGTTCTCTCTCTACAGGGACACCCAAATTCTACTACGGGTGAAGAATTCCCAAATTGTAGACAATAATGACAGTCTCAAAGATTGGGTTCCAAACGGAGATCACAATCCCTGTAAATGGACTGGCATTACCTGCGATGCACGGAATCAATCAGTTGTCTCAATTGATCTCACCTCCACTGGCATTTACGGTGGGTTTCCGTTTGATTTTTGCCGGATTCGGACTCTCCAAAACCTTTCTCTTGcacaaaattttcttggtGATACTATCTTGCCTCAGCCGCTGGCTCTCTGCTCCCACCTTCGTCTCCTGGACCTCTCTGATAACTTGTTTGTCGGAGTGTTACCGGAATTCCCGTCGGAGTACTCTGAACTAAGAGCGCTTAACGTCTCAGTCAACAACTTCACTGGTGATATTCCGGCCAGCTTTGGCCGGTTTCCACGACTGAGTGTGCTGTGTTTATCCGGAAACTTGCTCAATGGAACGGTTCCTGCCTTCTTAGGCAATCTCAGTGAGTTAACTCGATTAGAGCTCTCTTATAATCCACTCAAGCCAGGACTTTTGCCCTCCGAAATAGGAAATCTGTCCAAACTTGAGGCTGCAATTATCAGCAATGCAAATCTTGCAGGGGCTTTACCAGACTCAATAGGGAATCTTGTGTCACTGAAGAACTTGGATTTGTCAACCAATTCCCTGTCAGGTAAAATTCCAGATAGCATTTCAGGTTTGAGAAACGTGGAGCAAATTGAGCTATATGAGAACCTACTTTCTGGTGAATTACCTCGAGGTTTAGGAAACCTTAGCAGTTTACTCAGATTAGATCTCTCTCTTAACAATCTCACGGGGAAATTGCCAGAGAATATCGCCGCTTTGCACCTGACCTCTCTGCACTTGAACGACAATTTCCTTGAAGGAGAAATCCCAGCAAGTTTAGCTTCTAATCCAAATTTAGAGGAATTGCAGCTCTTTAACAACAGCTTTTCTGGCAAACTACCGGAAGATCTCGGGAGAAACTCCGAATTACGGAACTTTGATGTCTCTACCAATGACTTCACGGGTGAATTGCCTAAGTTTCTCTGTCAAAGGAACAACCTTCAGAGTCTTATCACTTTTTCGAATCGGTTTTCCGGAGCTTTACCCGAGCAATACGGCGAGTGTCATTCGCTCTATTATGTCAGAATTGAGGACAACGAACTTTCTGGAAAGGTTCCACCAGAGTTTTGGGGTCTTCCTGGCCTTCAACATCTGAGAATGGATAATAACAGATTTGAAGGAATGATTTTTCCTTCAATCTCCGGCATTCGGGGACTGGAGAAACTTATTTTATCCGGCAATAGTTTTTCCGGGCACTTGCCGGTGGAAATTTGTGAACTTCATGAGCTCGTGGTGCTTGATATAAGCATAAACCGGTTCACCGGTGAAGTTCCATCGTGTATAACTGGCTTGAGAAAGTTACAGAACCTTAGGATGCAGGAGAACATGTTCACCGGCGAGATTCCCAGTAAAATGAGTTCATGGACCGACTTGACCGAATTGAACTTGTCCTACAACCGACTCTCCGGTAAAATTCCATCTGAACTGGGTAATTTACCAGACTTAACTTATCTCGACCTCGCGGTAAATTTATTAACGGGGGAGATTCCTGTGGAATTGACGAAGCTCAAGCTCAATCAGTTCAATGTGTCGGGCAACAAATTATACGGAAAGGTGCCTGATGCTTTCGCTCACCAATTATATTCGTCAGGCTTACTCGGCAACCCGGATCTCTGTAGCCCAGATTTGAACTCCCTGCCACCGTGttccaaaaagaggcctttatctttaattgctataattattttagccGCATGCGTTGTGCTCCTTGTTGGGTCTCTGCTCTGGATCATAAAGAGCAAGTCATTTGCTTTTGGGAACAAATACAAGCGTGTTTATAAGACAAGCACATTCCAAAGAATTGAGTTTAACGAAGGAGATATACTCCCATTCTTAACCAGCGATAACCATATTGGCACCGGGAGTTCGGGTCGGGTATATAGAGTGAAGCTGAAAACAGGGGAGGCAGTTGCAGTGAAAAAACTGTGGGGTGGTGCCGAGAAACCTGATACAGAATCACTGTTCAGGTCGGAGGTCGAAACATTGGGTCAAATTCGGCATGCTAATATTGTGAAACTGTTATTTAGTTGCAGTGCAGATGATTTCAGGCTTTTGGTGTACGAGTACATGGAGAATGGGAGCTTAGGGGACGTTCTGCACGGCGAAAAGTGTGGACGGTTAATGGACTGGTCGAGGCGCTTCAGCATAGCAGTGGGTGCAGCTCAAGGTTTGGCATATTTGCATCATGGTTGTGTGTCGCCGATTCTTCACAGAGACGTCAAGAGTAATAACATACTGTTGGACCAAGAGTTTAGGCCTCGCGTAGCAGACTTTGGCCTGGCTAAGACATTACAGCGAGGGGCCTCCGACGGTGCTGCCGCTACGTCCAGGGTCGCTGGATCTTACGGCTACATTGCTCCTGAATATGCTTACACAGTCAAAGTGACCGAAAAAAGCGACGTGTACAGTTTTGGAGTGGTGTTAATGGAATTGGTGACCGGCAAGAGGCCCAACGATCCATCTTTTGGCGAGAACAAAGATCTGGTGAAGTGGATCACCGAGACGGCTTTATCATGTCCCGAGGGAGGAAGTGGCAATGTTGAAGCTCGATGGAACAATTTGGGCCACGTTGTAGACCCAAGATTGAATTGGTCCAGACATGATTATGAGGAGGCCGAAAAGGTTTTGAATGTGGCTCTACTTTGCACCTCAGCTTTTCCCATTAATAGACCCTCAATGAGAAGGGTGGTTGAATTGCTCAAGGAGCATAAATTAACTCACCCTTTCTCCTA 2957 0.4494 MPQLILNPLSFLLLSLLCFRRLSPVFSLYRDTQILLRVKNSQIVDNNDSLKDWVPNGDHNPCKWTGITCDARNQSVVSIDLTSTGIYGGFPFDFCRIRTLQNLSLAQNFLGDTILPQPLALCSHLRLLDLSDNLFVGVLPEFPSEYSELRALNVSVNNFTGDIPASFGRFPRLSVLCLSGNLLNGTVPAFLGNLSELTRLELSYNPLKPGLLPSEIGNLSKLEAAIISNANLAGALPDSIGNLVSLKNLDLSTNSLSGKIPDSISGLRNVEQIELYENLLSGELPRGLGNLSSLLRLDLSLNNLTGKLPENIAALHLTSLHLNDNFLEGEIPASLASNPNLEELQLFNNSFSGKLPEDLGRNSELRNFDVSTNDFTGELPKFLCQRNNLQSLITFSNRFSGALPEQYGECHSLYYVRIEDNELSGKVPPEFWGLPGLQHLRMDNNRFEGMIFPSISGIRGLEKLILSGNSFSGHLPVEICELHELVVLDISINRFTGEVPSCITGLRKLQNLRMQENMFTGEIPSKMSSWTDLTELNLSYNRLSGKIPSELGNLPDLTYLDLAVNLLTGEIPVELTKLKLNQFNVSGNKLYGKVPDAFAHQLYSSGLLGNPDLCSPDLNSLPPCSKKRPLSLIAIIILAACVVLLVGSLLWIIKSKSFAFGNKYKRVYKTSTFQRIEFNEGDILPFLTSDNHIGTGSSGRVYRVKLKTGEAVAVKKLWGGAEKPDTESLFRSEVETLGQIRHANIVKLLFSCSADDFRLLVYEYMENGSLGDVLHGEKCGRLMDWSRRFSIAVGAAQGLAYLHHGCVSPILHRDVKSNNILLDQEFRPRVADFGLAKTLQRGASDGAAATSRVAGSYGYIAPEYAYTVKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENKDLVKWITETALSCPEGGSGNVEARWNNLGHVVDPRLNWSRHDYEEAEKVLNVALLCTSAFPINRPSMRRVVELLKEHKLTHPFS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01857 985 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Bva11g01857 985 ProSiteProfiles Protein kinase domain profile. 687 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01857 985 SMART serkin_6 687 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01857 985 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515
Bva11g01857 985 Pfam Leucine Rich Repeat 533 554 IPR001611 GO:0005515
Bva11g01857 985 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Bva11g01857 985 SMART LRR_typ_2 434 454 IPR003591 -
Bva11g01857 985 SMART LRR_typ_2 243 267 IPR003591 -
Bva11g01857 985 SMART LRR_typ_2 530 554 IPR003591 -
Bva11g01857 985 SMART LRR_typ_2 194 219 IPR003591 -
Bva11g01857 985 SMART LRR_typ_2 458 482 IPR003591 -
Bva11g01857 985 SMART LRR_typ_2 291 315 IPR003591 -
Bva11g01857 985 SUPERFAMILY RNI-like 78 400 - -
Bva11g01857 985 Gene3D Transferase(Phosphotransferase) domain 1 765 982 - -
Bva11g01857 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 14 980 - -
Bva11g01857 985 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 980 - -
Bva11g01857 985 Gene3D Phosphorylase Kinase; domain 1 674 764 - -
Bva11g01857 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Bva11g01857 985 Pfam Protein kinase domain 689 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01857 985 SUPERFAMILY L domain-like 315 621 - -
Bva11g01857 985 SUPERFAMILY Protein kinase-like (PK-like) 688 975 IPR011009 -
Bva11g01857 985 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Bva11g01857 985 Gene3D Ribonuclease Inhibitor 29 314 IPR032675 -
Bva11g01857 985 Gene3D Ribonuclease Inhibitor 315 629 IPR032675 -
Bva11g01857 985 ProSiteProfiles Leucine-rich repeat profile. 532 555 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01857 Bva-Chr11 16192381 16196627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01857 31 979 Receptor kinase-like Gene Family AT5G65710 57.927 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva11g01857 Pkinase 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01857 - - gmx:100813889 1374.38