Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01812 ATGGATACCTTGTTTAGGCTTGTGAGTTTCCATCAAACTGATCAATCTCTCAACTCCACCAGCAGAACTTCTAGCAGCTCTAGATCCTCCAGGCAAAACTATCATCACTGCCAGCAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTGTCCTCGTCTTCTTCTAAGCACCACTATCCTTATCATCCCCACCCTTCCACCACCTCCGCCAGCACTCCCACTACTCTCACCCCTAACACTACTACTTTCAACACAAATACTACCAGCACTCCCACCACCACTGATTTCTCTTTCTCGCCCACCAGTGATTTCAACTTCGAATTTTCCGGCAAGTGGGCAACTGATATCCTCCTCGATACCGCGCGTGCCATCGCCGACAAGAACAGTGCACGTGTCCAGCAACTCACGTGGATGCTCAATGAGCTCAGCTCCCCTTACGGTGACACCGATCAAAAGCTCGCCGCCTATTTTCTCCAAGCATTGTTTAGCCGCATGACAGACGCCGGTGACCGTACGTACCGTACTTTAACCTCGGCCTCCGAGAAAACATGCTCCTTCGAATCAATGAGAAAGATGGTCTTGAAGTTTCAAGAAGTTAGCCCTTGGACAACGTTTGGTCATGTCGCTTGCAACGGTGCTATCTTAGAATCCTTGGAAGGTGAGCCAAAGCTGCATATAGTTGATATCAGTAATACCTATTGCACCCAATGGCCTACCTTCCTCGAAGCATTGGCTACTCGCAGCGACGAGACACCGCATCTCCGTTTAACCACCGTGGTAACCAGCAGAGCCAGTGGCTCCGTGGCAGCTGTTCAGAGGGTCATGAAGGAAATAGGCACTAGAATGGAGAAATTTGCACGGCTTATGGGTGTGCCCTTTAAATTCAATGTCATTTATCATGCCGGTGATCTTTCAGAATTGAACCTGGCCGAATTGGACATCAAAGACGATGAAGCTCTAGCTGTTAACTGTGTGAATGCTTTGCATTCTGTTTCAGCGGTTGGTAACCAGAGGGACATGTTGATATCTTTGTTGCGAGGATTACAACCTAGGATAATCACTGTCGTGGAAGAAGAAGCTGATCTCGATGTCGGTTATGACGGATATGAGTTTGTAAAAGGTTTCCAAGAATGCTTGAGATGGTTTAGGGTTTACTTTGAGAGCTTGGACGAGAGCTTCCCAAGGACGAGCAACGAGCGTTTGATGCTTGAAAGGGCAGCGGGAAGAGCTGTCGTTGACTTGGTGGCTTGTTCTCCGTCGGAGTCAATAGAGCGACGCGAGCCCGCGGCTCGATGGTCGCAGCGTCTGCATGGTGGCGGCTTCAATCCTCTTTCGTTTAGCGACGAGGTTTGCGACGACGTGAGAGCCTTGCTGAGGAGGTACAAGGAAGGTTGGTCAATGACACAGTGCTCCGATGCCGGAATATTCTTGTCGTGTAAGGATCAGCTGGTGGTGTGGGCCAGTGCATGGAGGCCTTG 1490 0.4946 MDTLFRLVSFHQTDQSLNSTSRTSSSSRSSRQNYHHCQQEDEECFNFFMDEEDLSSSSSKHHYPYHPHPSTTSASTPTTLTPNTTTFNTNTTSTPTTTDFSFSPTSDFNFEFSGKWATDILLDTARAIADKNSARVQQLTWMLNELSSPYGDTDQKLAAYFLQALFSRMTDAGDRTYRTLTSASEKTCSFESMRKMVLKFQEVSPWTTFGHVACNGAILESLEGEPKLHIVDISNTYCTQWPTFLEALATRSDETPHLRLTTVVTSRASGSVAAVQRVMKEIGTRMEKFARLMGVPFKFNVIYHAGDLSELNLAELDIKDDEALAVNCVNALHSVSAVGNQRDMLISLLRGLQPRIITVVEEEADLDVGYDGYEFVKGFQECLRWFRVYFESLDESFPRTSNERLMLERAAGRAVVDLVACSPSESIERREPAARWSQRLHGGGFNPLSFSDEVCDDVRALLRRYKEGWSMTQCSDAGIFLSCKDQLVVWASAWRP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01812 496 Pfam GRAS domain family 119 495 IPR005202 -
Bva11g01812 496 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 495 IPR005202 -
Bva11g01812 496 MobiDBLite consensus disorder prediction 15 33 - -
Bva11g01812 496 MobiDBLite consensus disorder prediction 15 35 - -
Bva11g01812 496 MobiDBLite consensus disorder prediction 60 98 - -
Bva11g01812 496 MobiDBLite consensus disorder prediction 58 98 - -
Bva11g01812 496 ProSiteProfiles GRAS family profile. 108 495 IPR005202 -
Bva11g01812 496 PANTHER PROTEIN SHORT-ROOT 1 495 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01812 Bva-Chr11 15979070 15980961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01812 1 496 GRAS Transcription Factor Family AT4G37650 59.962 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva11g01812 GRAS 5.7e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01812 - - vvi:100263197 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00515 08 2638481 2640190 Bva11g01812 11 15979070 15980961 BWGD
Bva11g01812 11 15979070 15980961 Bva11g01812 11 15979070 15980961 ECH