Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01811 ATGGTTCGCTCTGGGAGGGGTGTTGTTAGCATGGCAAACAGTGGTCCACACACTAATGGCTCCCAGTTTTTCATCCTATATAAATCTGCAAATCATTTGAACTACGAACATACAGTTTTTGGTGTAGTCGTTGGTGGCTTGACTACACTTGCAGCCATGGAAAAGGTTTCCGTTGATGATAATGATCGACCTCCGGAGGAAATTAAGATAACAAATGTCACGATTTTTGTCAATTCTTACTCATA 245 0.4122 MVRSGRGVVSMANSGPHTNGSQFFILYKSANHLNYEHTVFGVVVGGLTTLAAMEKVSVDDNDRPPEEIKITNVTIFVNSYS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01811 81 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 3 80 - -
Bva11g01811 81 SUPERFAMILY Cyclophilin-like 4 78 IPR029000 -
Bva11g01811 81 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 75 IPR002130 GO:0000413|GO:0003755
Bva11g01811 81 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 3 80 IPR044666 -
Bva11g01811 81 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 74 IPR002130 GO:0000413|GO:0003755
Bva11g01811 81 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 7 22 IPR002130 GO:0000413|GO:0003755
Bva11g01811 81 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 IPR002130 GO:0000413|GO:0003755
Bva11g01811 81 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 22 34 IPR002130 GO:0000413|GO:0003755
Bva11g01811 81 Gene3D - 2 81 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01811 Bva-Chr11 15975633 15976200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01811 1 81 U-box Gene Family AT5G67530 75.309 2.38e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01811 K10598 - egr:104418441 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01811 11 15975633 15976200 Bva11g01811 11 15975633 15976200 ECH