Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01804 ATGATGGAGAGTTATCTAAATGAGAATTTTGGAGGTGTGAAGTCTAAGAACTCGTCAGAGGAGGTTCTTCAGAAATGGAGGAAACTATGTGGGGTTGTAAAGAACCCCAAAAGAAGGTTTCGTTTCACTGCCAATCTCTCCAAGCGTGGCGAAGCAGCTGCCATGCGTCGTACCAATCAGGAGAAGCTGAGGATTGCTGTTTTGGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTACAACCGAGTGATTACACTGTACCTGACGAAGTTAAAGCAGCAGGATATGATATCTGTGCTGACGAATTGGGATCTATTGTTGAAGGCCATGATGTAAAGAAGCTGAAATTTCATGGTGGGGTAAATGGAATAGCAGAAAAGCTTCGTACATCAACCACTAATGGGCTTGGCATTGAGAGTGAGTTACTTAATAAGAGAGAGCAGATTTATGGGATCAACAGATTTACTGAGAGCGAAATGCGGAGTTTCTGGGTTTTTGTCTGGGAAGCCCTTCAAGATATGACTCTCATGATCCTTGCAGTGTGTGCTTTCGTGTCTCTGATTGTTGGCATAGCAACGGAAGGGTGGCCCAAGGGAGCACATGATGGTCTTGGAATAGTTGCCAGTATCTTACTAGTTGTGTTTGTCACAGCAACAAGTGATTATCGTCAATCATTACAATTCAAGGATTTAgacaaggagaagaaaaagatctCCATTCAGGTCACAAGAAATGGGTATAGGCAGAAAATGTCAATATATGATTTACTTCCTGGTGATATTGTGCATCTTTCTATCGGAGACCAAGTCCCTGCAGATGGACTATTTGTTTCAGGATTTTCGGTGTTGATTGATGAGTCAAGTTTAACTGGAGAGAGTGAGCCAGTGATGGTTTGTTCTGAAAatcctttccttctttctggAACTAAGATCCAAGATGGATCATGCAAGATGCTGATCACCACTGTTGGAATGAGGACTCAATGGGGCAAGTTGATGGCAACTCTTAGTGAAGGTGGTGATGATGAAACCCCATTGCAAGTCAAACTGAACGGAGTGGCAACCATTATTGGGAAGATAGGCCTATTCTTTGCATTGGTAACTTTTGCAGTTTTGGTGCAAGGATTAGTAAGCCATAAATTCCGTGAAGGAAGATTCTGGATCTGGGATGGGGATGATGCAATGGAGATGTTGGAATTCTTTGCTATTGCTGTTAccattgttgttgttgctgttCCAGAGGGGCTTCCATTAGCTGTGACATTGAGCCTTGCATTCGccatgaagaagatgatgaatgaCAAAGCCCTTGTCCGACATTTGGCAGCTTGTGAGACAATGGGATCAGCTACAAGCATATGCAGCGACAAGACCGGTACACTAACAACAAATCGCATGACTGTTGTGAAAACATGCATTTGTATGAATAGCAAGGAAGTGAGCAACAAGGATCCTAATTTGAGTTCTGAAATGCCAGAATCTGCCGTGAAGCTGCTGCTacaatcaatatttaataacaCTGGAGGAGAGGTTGTTActaacaaaaaaggaaaacatgaGATTTTGGGGACACCAACCGAGACTGCAATATTGGAGTTTGGCTTGTCACTTGGTGGGGATTTTCAAGCTGAGAGACAAGCATGTAAACTAGTTAAAGTTGAGCCATTCAACTCAACCAAGAAAAGGATGGGTGTAGTTGTGGAGCTTCCAGAAGGAGGCTTACGTGCCCACAGTAAAGGTGCTTCTGAAATAGTTCTGGCTGCTTGTGAAAAGTTTATCAACTCCAAAGGTGAGGTTGTCCCCCTTGATGAAGCATCCATAAATCATCTCAAGGTCACAATCAACCAATTTGCTAGTGAGGCACTTAGAACTCTATGCCTTGCCTATATGGATCTACAAAACGGGTTTTCTCCTAAAGACCCCATTCCTGTTTCTGGATATACCTGCATAGGAATAGTTGGCATCAAAGACCCCGTTCGCCCTGGTGTTAAGGAATCTGTTGCAGTTTGCCGTTCAGCTGGTATCAATGTACGGATGGTTACTGGTGACAATATTAATACTGCAAAGGCTATAGCAAGGGAATGTGGAATTTTAACAGATGGCATAGCCATTGAAGGTCCAGACTTTAGAGAGAAGAATATGGAGGAATTGCTTGAACTGATTCCCAAAATTCAGGTTATGGCTAGATCTTCTCCTTTAGACAAACATACATTGGTTAAACACCTTCGCACGTCTTTTGATGAAGTTGTAGCTGTAACTGGTGATGGAACTAATGATGCCCCAGCCCTCCATGAAGCTGACATTGGTCTTGCAATGGGCATCGCTGGTACCGAGGTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGATGATAATTTCTCCACAATTGTGACAGTGGCCAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTCGTGCAGTTCCAGCTGACAGTTAATGTGGTTGCATTACTTGTAAACTTCACTTCAGCCTGTCTGACAGgaAGTGCACCCCTCACAGCTGTTCAATTATTGTGGGTGAACATGATAATGGACACACTAGGAGCACTTGCACTTGCAACTGAACCTCCAAATGATGAATTAATGAAGCATACACCGGTGGGAAGGAAGGGGAATTTCATCAATAATGTCATGTGGAGGAATATCTTAGGACAATCATTGTACCAGTTTATGGTGATATGGATTCTTCAgtcaaaaggaaaatggatCTTCGATCTCGAGGGCTCTGATTCTGATCTCATCTTGAACACACTTATTTTCAACACATTCGTCTTCTGTCAGGTGTTCAATGAGATAAGCTCACGTGAAATGGAGGAAATCAATGTTTTCAGTGGCATATTGGATAATCAGGTTTTCGTGGCTGTCCTCAGTGCTACtgttatttttcaaatcattATAATCGAGTTACTAGGAACCTTCGCAAACACAACACCTCTCACTCTGGAACAATGGTTCATCTGCATATTCATCGGATTTTTGGGCATGCCAATTGCAGCTATCTTAAAGAAAGTCTCTGTCTGTAAAGCCTA 3053 0.4062 MMESYLNENFGGVKSKNSSEEVLQKWRKLCGVVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRIAVLVSKAAFQFIQGVQPSDYTVPDEVKAAGYDICADELGSIVEGHDVKKLKFHGGVNGIAEKLRTSTTNGLGIESELLNKREQIYGINRFTESEMRSFWVFVWEALQDMTLMILAVCAFVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVCSENPFLLSGTKIQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFALVTFAVLVQGLVSHKFREGRFWIWDGDDAMEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNRMTVVKTCICMNSKEVSNKDPNLSSEMPESAVKLLLQSIFNNTGGEVVTNKKGKHEILGTPTETAILEFGLSLGGDFQAERQACKLVKVEPFNSTKKRMGVVVELPEGGLRAHSKGASEIVLAACEKFINSKGEVVPLDEASINHLKVTINQFASEALRTLCLAYMDLQNGFSPKDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGINVRMVTGDNINTAKAIARECGILTDGIAIEGPDFREKNMEELLELIPKIQVMARSSPLDKHTLVKHLRTSFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKHTPVGRKGNFINNVMWRNILGQSLYQFMVIWILQSKGKWIFDLEGSDSDLILNTLIFNTFVFCQVFNEISSREMEEINVFSGILDNQVFVAVLSATVIFQIIIIELLGTFANTTPLTLEQWFICIFIGFLGMPIAAILKKVSVCKA 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01804 1017 SMART Cation_ATPase_N_a_2 116 191 IPR004014 -
Bva11g01804 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Bva11g01804 1017 Pfam Cation transport ATPase (P-type) 513 591 - -
Bva11g01804 1017 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 112 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva11g01804 1017 Gene3D - 169 1010 - -
Bva11g01804 1017 CDD P-type_ATPase_Ca_PMCA-like 143 886 - -
Bva11g01804 1017 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01804 1017 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01804 1017 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01804 1017 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 723 839 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01804 1017 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 546 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01804 1017 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 206 479 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01804 1017 SFLD Haloacid Dehalogenase 436 805 - -
Bva11g01804 1017 Pfam E1-E2 ATPase 238 432 - -
Bva11g01804 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1012 IPR023298 -
Bva11g01804 1017 Pfam Cation transporting ATPase, C-terminus 838 1011 IPR006068 -
Bva11g01804 1017 Pfam haloacid dehalogenase-like hydrolase 737 793 - -
Bva11g01804 1017 Pfam Cation transporter/ATPase, N-terminus 118 186 IPR004014 -
Bva11g01804 1017 Gene3D - 464 658 IPR023299 GO:0000166
Bva11g01804 1017 Gene3D - 18 78 - -
Bva11g01804 1017 Gene3D - 451 798 IPR023214 -
Bva11g01804 1017 PANTHER CATION TRANSPORTING ATPASE 3 1012 - -
Bva11g01804 1017 Gene3D - 137 337 - -
Bva11g01804 1017 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 663 IPR023299 GO:0000166
Bva11g01804 1017 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Bva11g01804 1017 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Bva11g01804 1017 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Bva11g01804 1017 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Bva11g01804 1017 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Bva11g01804 1017 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Bva11g01804 1017 SUPERFAMILY Calcium ATPase, transduction domain A 240 334 IPR008250 -
Bva11g01804 1017 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 50 IPR024750 GO:0005516
Bva11g01804 1017 SFLD p-type atpase 436 805 IPR044492 -
Bva11g01804 1017 SUPERFAMILY HAD-like 453 858 IPR036412 -
Bva11g01804 1017 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01804 Bva-Chr11 15951072 15955894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01804 2 1014 Primary Pumps ATPases AT4G37640 83.941 0.0 1743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01804 K01537 - csin:114319415 1733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00523 08 2667875 2672822 Bva11g01804 11 15951072 15955894 BWGD
Bva11g01804 11 15951072 15955894 Bva11g01804 11 15951072 15955894 ECH