Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01802 ATGGGGAGCTCTGtctctcctttctcttcaTCTAGCCTTCTGTGTTACGAAGGCGGAGATAACTTGGTACAAGAGGACGATTATGAAGACGCTGCTATTCACCCAATGAACCCAGGTTTCGATTTGGATAACGACCAATATATTgagtttttgtttcaaaaggAATTGGAATTTGTCTCCCAAAGTCTTCCATTGTCTTCTGGTGATACAAGTGTTCGTCTAAAATCCGTTGAGTGGATTTTCAATGCACAGGAAATACTTGGGTTCCAAGTTCATACAGCTTATTTATCAGTGACGTACTTTGATCGATTCTTTTCCAAGCGATCCATTAATGAAACTCAACCTTGGGGAGTTCAATTATTATCGTTGGGATGTTTATCTTTGGCAGCAAAGATGGACGAGCAGAAGGTGCCTTCTCTATGCGATTATCCAGTGACAGATTATATCTTCAAGAGCAAAACGATTCAGGATATGGAGCTACTGATTTTGAGTTGCTTGGATTGGAAAATGAGAGCAGTAACTCCTTTTGCTTATCTGCATTACTTTGTCAAGAAGTTCTGCGGCCAATCAAGATCAGAAGCAATTGTCTGTAGAGCCGTGGAACATGTTCTGGCCATCTCAAAAGatgttaatttgattaatcatCGACCATCTATTATTGCCTCTGCTGCTATATTGGCAACCTTTGATTGTACATTAACAAGACAGACCATGAATCATCGGATAAGTGTAATCCCATCGTGGGGATCTCTAGAAAGTGAACATGTTTTTTCCTGTTATAATCTAATGCAGGAAATAgcgagaagaaaaattaagaacacTCCTGCTTCCGATTTGTTGTCAACCAATTCGAGCTATGCTGCTGTAACTGAGAATTCCTCTCTCACTTCTGCTCTTAAAGCTAAGAGAAAACTTGACTTTAAGGCCGGTGAAGATTTTCCCGTACAAAAAGTACATAGGTCTTA 965 0.3731 MGSSVSPFSSSSLLCYEGGDNLVQEDDYEDAAIHPMNPGFDLDNDQYIEFLFQKELEFVSQSLPLSSGDTSVRLKSVEWIFNAQEILGFQVHTAYLSVTYFDRFFSKRSINETQPWGVQLLSLGCLSLAAKMDEQKVPSLCDYPVTDYIFKSKTIQDMELLILSCLDWKMRAVTPFAYLHYFVKKFCGQSRSEAIVCRAVEHVLAISKDVNLINHRPSIIASAAILATFDCTLTRQTMNHRISVIPSWGSLESEHVFSCYNLMQEIARRKIKNTPASDLLSTNSSYAAVTENSSLTSALKAKRKLDFKAGEDFPVQKVHRS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01802 321 SMART cyclin_7 78 164 IPR013763 -
Bva11g01802 321 Pfam Cyclin, N-terminal domain 48 170 IPR006671 -
Bva11g01802 321 SUPERFAMILY Cyclin-like 44 170 IPR036915 -
Bva11g01802 321 Gene3D - 70 171 - -
Bva11g01802 321 Gene3D - 172 244 - -
Bva11g01802 321 SMART Cyclin_C_2 173 299 IPR004367 -
Bva11g01802 321 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Bva11g01802 321 PANTHER CYCLIN-D5-1 47 284 - -
Bva11g01802 321 PANTHER CYCLINS 47 284 IPR039361 -
Bva11g01802 321 CDD CYCLIN 77 163 IPR013763 -
Bva11g01802 321 Pfam Cyclin, C-terminal domain 173 286 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01802 Bva-Chr11 15940840 15942457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01802 13 253 Core Cell Cycle Gene Families AT4G37630 35.294 4.19e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01802 K18811 - gmx:100798140 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01802 11 15940840 15942457 Bva11g01802 11 15940840 15942457 ECH
Bva08g00524 08 2675379 2677560 Bva11g01802 11 15940840 15942457 ECH