Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01801 ATGAACAATCCAAACGATCGCTTAAAACAAGTTGAGCATACACAGATGGCTTACACGGACAGCAACTGTTGCAAGACTCTCCAAGATGCCAAGAAATTTACTCCATTACCACCTCCTTTGCCTCGTTCAAAAGCAGCTAGTCATCCTTGCAAGGGGGATTTAGTGATAAGTGATTCACCACCAAGAGGACGTAGCTGTGTCTCTACTGCTGCAAGAGATATGTGGGAGCGCTTATTTGATGAAGGTTATAAAGCGGATGTTTACATTAATACTGATAATGGTGGCATTGTTTACGCTCATTCTAATATTCTAGCTATGGCTTCCCCTGTTATGAGAGGCATGCTAAAGCAAGTAAGTCGCCATCATCACCGGCGATCAATCTCAATCCGTGGTGTTCCACCTGACGCAGTCCGAGTTTTTATACGATATTTGTATTCTTCTTGttatgagaaagaagaaatggagGAATACGTCTTGCATTTGTTGGTGCTATCACATGCATTTATGGTCCCCCACTTGAAGCGTGAATGTGAAGAGAAGCTAGAGGTTGGTTTGCTCAACGTAGACAATGTAGTCGATATATTACAACTTTCCCTACTGTGCAATGCTCCCCGGCTTAGTCTCATTTGTCACCGTATGATCCTAGAATATTTTAAAGCTGTTTCAGTGTCTGAAGGGTGGAAAATAATGAAGGAGAGCCACCCGGTTCTAGAAAAGGAACTCCTGGAATCCATGATTGAGGAAGAAAATagaaaaaaggaaaggatcagaaaaattaaagagaggaAGATCTATATGCAATTATACGAGGCAATGGAAGCTCTTGTTCACATATGCAAAGATGGTTGTCGAACGATTGGTCCTCATGATAAGGACTTCAACCCGAACCAGGCACCCTGTGGTTATGCAGCATGCAAGGGTCTAGAACTGCTTGTTCGTCATTTTGCTGGCTGCAAGTTGAGAGTTCCGGGTGGCTGCATTCATTGCAAGAGGATGTGGCAATTATTAGAGTTACACTCTCGGCTGTGTGCTGATTCCAGTAGCTGCAGAGTTCCTTTATGCCAGAACTTCAAGGAtagaatattaaaacaaagcaagaaAGACGAAATTAGGTGGAAAATATTGGTTGAGAAAATCTTAAGAACAAAGGGCATTGCTGTAGCACCATTCTTCGAACGGGAATA 1184 0.4037 MNNPNDRLKQVEHTQMAYTDSNCCKTLQDAKKFTPLPPPLPRSKAASHPCKGDLVISDSPPRGRSCVSTAARDMWERLFDEGYKADVYINTDNGGIVYAHSNILAMASPVMRGMLKQVSRHHHRRSISIRGVPPDAVRVFIRYLYSSCYEKEEMEEYVLHLLVLSHAFMVPHLKRECEEKLEVGLLNVDNVVDILQLSLLCNAPRLSLICHRMILEYFKAVSVSEGWKIMKESHPVLEKELLESMIEEENRKKERIRKIKERKIYMQLYEAMEALVHICKDGCRTIGPHDKDFNPNQAPCGYAACKGLELLVRHFAGCKLRVPGGCIHCKRMWQLLELHSRLCADSSSCRVPLCQNFKDRILKQSKKDEIRWKILVEKILRTKGIAVAPFFERE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01801 394 Coils Coil 239 262 - -
Bva11g01801 394 Gene3D - 187 260 - -
Bva11g01801 394 CDD BACK 187 247 - -
Bva11g01801 394 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 24 392 IPR044513 -
Bva11g01801 394 Gene3D Potassium Channel Kv1.1; Chain A 65 186 IPR011333 -
Bva11g01801 394 SMART TAZ_2 262 355 IPR000197 -
Bva11g01801 394 Gene3D TAZ domain 261 382 IPR035898 -
Bva11g01801 394 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 24 392 - -
Bva11g01801 394 SUPERFAMILY TAZ domain 262 360 IPR035898 -
Bva11g01801 394 Pfam TAZ zinc finger 269 354 IPR000197 -
Bva11g01801 394 Pfam BTB/POZ domain 77 182 IPR000210 GO:0005515
Bva11g01801 394 SMART BTB_4 85 185 IPR000210 GO:0005515
Bva11g01801 394 SUPERFAMILY POZ domain 68 181 IPR011333 -
Bva11g01801 394 ProSiteProfiles BTB domain profile. 85 153 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01801 Bva-Chr11 15933700 15937318 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Bva11g01801 BTB 5.6e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01801 - - lja:Lj2g3v1968190.1 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01801 11 15933700 15937318 Bva11g01801 11 15933700 15937318 ECH