Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01800 ATGAGAGCTCATCATTTGAGCTTCTTTTTGATCGTATTATTATCTCTATCCATCCTAGTCCCCACTGCAAATGGGGTCAACACCATTCAATTCCGCACTGACAATGAATCTCAGACAAGAAGAATTCTGCACCAGCCCTTGTTTCCGGCGTCTGCTCCACCACCAGACACCGACTCACCACCGCCACCACCGCCGCCAGTGGACACTCCACCCTCTCCCAATACTGACATTCCCTTCTTTCATGAGTATCCCGCCGGGCCTCCCCCAGATCAGAATCAGCCACCACCGTCTAGTTCCAGTGGCACAATAATTGCGAACCCAACAGCAACTCAGCCTACCAAGCCAACAAAAAAGGTCGCAATTGCGATCTCTGTAGGAATTGTCACGCTTGGTATGCTCTCGGCCCTTGCCTTCTTCTTGTACAAGCACCGCGTGAAGCATCCCGGAGAGACCCAGAAACTCGTCGGTGGGAATTCTCAGAGGTTACCGGACGATTCAAGAGCACCGCCATCTAGCTTTCTCTATATTGGGACTGTGGAGCCAAGCCAAACATCAGTGAGTGAGCCAAATGAAACCAATGCGGCTAACAGGTCGCCTTATCACAAACTTAATTCAATTAAGCGATCCGATCGCTACCGTCCAAGTCCTGAATTGCAGCCACTGCCGCCGTTGAGCAAGCCTATAGATGGTAATCACCCGCCGGCAGTATCGTCTTCGTCGTCCGACGAGGAAAGCCACGAGACGGTGTTTCATTCGCCGCAGGGATCATCGCTCATCAGTTATGAGGATAGCTACTACACACCAATTTCGCGACAGAGTTCTCTGGCTAACGGTAGCCCAGCGCCAGTAGCCAGTGCCAAGAGTGACAGTTATTCCGCAGCTTCTGTTGTTCCTTACTCAAAGAGAACTTCACCAAAATCTCGGATTTCGGCTTCGTCGCCGGATATAAGGCATGTCATCATACCGTCAATAAAGCAAGCTCCACCTCCTCCGCCGCCACCACTGCAACCTTCTTCAACACCGCATCTGGATAAGCAAGTCGCCTCCGGTCCTTCCAGGAGACCAAAATTCTCGGCGCCACCACCAGCACCAAACTTGGCGCGTCTTCAATCACCAAACAACACACCCTCCCACGCAACCAAGAATTCATCATTTAATACTCATGCGCCCCCTCCCCCTCCACCTCCACCGCCACCTCCACCGCCACACACAACACGAAAAGTAGGGTCTCCGGCAACCAGTGTTTCCTCATCTTCTGTATCGAGAAAGCCACAATCGGACTCTCCAAATCTAGGAACTCCCTCTACTAATGGCATTACAAAAGCTTCCCAACGTGTTGATGAAAGTGTAAGCTCGTTCGAGAGGCTTGAAGCCGATGACACGGATAGTGCGAAACCCAAGTTGAAGGCTTTGCATTGGGATAAAGTCCGTGCGACTTCAGACCGTGCTACAGTGTGGGACCAGCTAAAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAGACACTGTTTGGCTGCAATTCTACGAATTCCATCACAAAGGAACCCACAAGAAAATCAGTTCTTCCCCCTTTTGAGCACGAGAATAGGGTCTTAGACCCGAAGAAGTCTCAAAACATAGCTATACTATTAAGGGCATTGAATGTGACAAGAGATGAAGTGTCCGAAGCTCTTTTAGATGGGAATCCAGAAGGGTTAGGTGCTGAGCTTTTGGAAACTTTGGTTAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTGAAAAGCTATAGTGGTGACCTCTCAAAACTTGGGTCCGCTGAAAGATTTCTTAAATCTGTGCTCGATATCCCTTTCGCTTTCAGAAGAGTTGAAGCCATGCTATACAGAGCTAACTTTGATGCAGAAGTTAATTATCTAAGGAAGTCATTTCAAACCTTAGAGGCAGCGAGTGAGGAGTTAAAGAACAGCAGGTTATTCCTCAAACTCCTTGAAGCTGTTCTTAGGACAGGAAACAGAATGAATGTTGGCACTAACAGAGGTGATGCTAAAGCTTTTAAACTGGAGACACTCTTAAAACTAGTAGACGTAAAGGGAACAGATGGAAAAACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCAGAAGGTGCAGGTGATGATTCTGCAAACGCTAGTGTTCAGAACCAAATGAATACCAAATTCAATGAGGATGAGTTCAAGAAGCAAGGACTGCAGGTTGTCGCCGGGCTCAGTAGAGACCTCGGCAATGTCAAAAAAGCAGCAGGAATGGACTCAGACGTCTTAAGCAGCTATGTCTCAAAGCTAGAAATGGGGCTTGATAAAGTGAGATCAGTCTTGCAATATGAGAAACCAGATATGCAAGGGAATTTCTTCAActctatgaaaatatttctgaaAGATGCTGAAGCGGAAATTATCAGGATCAAGGCTGATGAAAGAAAGGCCTTATTCCTTGTCAAAGAAGTTACAGAATATTTTCATGGGGACACAGCAAAGGAAGAAGCCCACCCTTTCAGAATCTTTATGATTGTCAGAGactttctaaatattttggaTCAAGTGTGCAAGGAAGTGGGGAGGATGCAGGACAGAACTGTGATTGGTTCTGCCAGATCCTTCCGCATAGCTGCAAATGCTTCATTACCTGTTCTCAGCAGGTATAACGCGAGACAAGATAGAAGCTCAGATGAGGAAAGCTCATCCCCATA 2720 0.4676 MRAHHLSFFLIVLLSLSILVPTANGVNTIQFRTDNESQTRRILHQPLFPASAPPPDTDSPPPPPPPVDTPPSPNTDIPFFHEYPAGPPPDQNQPPPSSSSGTIIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYKHRVKHPGETQKLVGGNSQRLPDDSRAPPSSFLYIGTVEPSQTSVSEPNETNAANRSPYHKLNSIKRSDRYRPSPELQPLPPLSKPIDGNHPPAVSSSSSDEESHETVFHSPQGSSLISYEDSYYTPISRQSSLANGSPAPVASAKSDSYSAASVVPYSKRTSPKSRISASSPDIRHVIIPSIKQAPPPPPPPLQPSSTPHLDKQVASGPSRRPKFSAPPPAPNLARLQSPNNTPSHATKNSSFNTHAPPPPPPPPPPPPPHTTRKVGSPATSVSSSSVSRKPQSDSPNLGTPSTNGITKASQRVDESVSSFERLEADDTDSAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSTNSITKEPTRKSVLPPFEHENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKSYSGDLSKLGSAERFLKSVLDIPFAFRRVEAMLYRANFDAEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDVKGTDGKTTLLHFVVQEIIRSEGAGDDSANASVQNQMNTKFNEDEFKKQGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEMGLDKVRSVLQYEKPDMQGNFFNSMKIFLKDAEAEIIRIKADERKALFLVKEVTEYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTVIGSARSFRIAANASLPVLSRYNARQDRSSDEESSSP 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01800 906 MobiDBLite consensus disorder prediction 250 311 - -
Bva11g01800 906 SMART it6_source 458 870 IPR015425 -
Bva11g01800 906 MobiDBLite consensus disorder prediction 448 463 - -
Bva11g01800 906 MobiDBLite consensus disorder prediction 387 406 - -
Bva11g01800 906 Gene3D Formin, FH2 domain 452 867 IPR042201 -
Bva11g01800 906 MobiDBLite consensus disorder prediction 176 202 - -
Bva11g01800 906 MobiDBLite consensus disorder prediction 150 463 - -
Bva11g01800 906 MobiDBLite consensus disorder prediction 368 386 - -
Bva11g01800 906 PANTHER FORMIN-RELATED 3 906 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva11g01800 906 MobiDBLite consensus disorder prediction 324 339 - -
Bva11g01800 906 MobiDBLite consensus disorder prediction 407 447 - -
Bva11g01800 906 Pfam Formin Homology 2 Domain 461 855 IPR015425 -
Bva11g01800 906 MobiDBLite consensus disorder prediction 47 116 - -
Bva11g01800 906 PANTHER FORMIN-LIKE PROTEIN 3 906 - -
Bva11g01800 906 MobiDBLite consensus disorder prediction 96 116 - -
Bva11g01800 906 MobiDBLite consensus disorder prediction 48 73 - -
Bva11g01800 906 ProSiteProfiles Formin homology-2 (FH2) domain profile. 458 881 IPR015425 -
Bva11g01800 906 SUPERFAMILY Formin homology 2 domain (FH2 domain) 392 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01800 Bva-Chr11 15928561 15932459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01800 40 896 FH2 protein (formin) Gene Family AT5G67470 60.865 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01800 - - cpap:110822211 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00526 08 2688099 2692669 Bva11g01800 11 15928561 15932459 BWGD
Bva11g01800 11 15928561 15932459 Bva11g01800 11 15928561 15932459 ECH