Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01795 ATGGGCTTCATTGGACCTAGCCTTCGGCCCAAATTTCTTAAGCAGAATATCGAGCCCATATCAGAAGAGATCACAAGGTTGATATCTGTCGTCCGTAAttctccttcattttcttcttcctacTGGGGTTCCAAACTTTCGCCATCCTCTCAATCCTTCTCGCCCATTATTATCTTCCGCTACTTCGCTTCGTCTGCTGCAACGCCACTCTCACGCCCTCTCCACCATTACCCGCCACCCCGATCCAACCACAACCGCCCGCTTCCGCTGCCACAACCCGACACCCTGGCGCAGAAGATTGGAAAATCTATTCGCCGGCCCGGCGCTGCCTCTAAGGCAAGGGTTTATGTTGACATCAACGTTGTTCGTCCCAAGGAATACTGGGACTACGAGTCCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTAGTGAGGAAGGTGGGAAGGGGCAAATATAGTGAGGTGTTCGAGGGGGTTCACTGCACGAATAATGAAAAATGCATCATCAAGATACTCAAACcggtgaagaagaagaagATTAAGAGGGAGATCAAAATACTGCAGAATCTTTGTGGAGGGCCCAACATTGTGAAGTTGCTTGACATCGTTAGAGACCAACAGTCAAAGACTCCTAGccttatttttgaatatgttAACAATACTGATTTTAAAGTGCTCTATCCTACACTGTCAGACTACGACATACGATACTACATCTATGAACTTCTCAAGGCACTGGATTATTGCCACTCGCAAGGAATAATGCATCGAGATGTAAAGCCACATAATGTAATGATTGACCATGAGCAGCGTAAGCTACGTCTTATAGACTGGGGGCTTGCAGAGTTCTATCATcctgaaaaagaatataatgttCGAGTTGCCTCAAGATATTTTAAAGGTCCCGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTTTAGATTTGTGGAGCCTTGGTTGTATGTTTGCTGGAATGATATTCCGCAAGGAGCCATTCTTTTACGGACATGATAACTATGATCAGCTGGTCAAGATTGCCAAGGTACTTGGGACCGATGAGTTGAATGCATATCTAAACAATTATCGCATAGAGTTGGATCCACATCTTGCAGCACTTGTTGGGAGGCATAGCCGGAAGccatggaccaagttcattAATGTGGATAATCAACACTTGGCTGTTCCCGAGGCCGTTGACTTTGTTGACAAGTTGCTACGGTATGATCACCAAGAACGCCCAACGGCGAAAGAAGCAATGGCCCATCCTTACTTCAATCCAATTAGAAATGCCGAAAGCAGTAGAACTCGTACACACTA 1328 0.43 MGFIGPSLRPKFLKQNIEPISEEITRLISVVRNSPSFSSSYWGSKLSPSSQSFSPIIIFRYFASSAATPLSRPLHHYPPPRSNHNRPLPLPQPDTLAQKIGKSIRRPGAASKARVYVDINVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPEKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNNYRIELDPHLAALVGRHSRKPWTKFINVDNQHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNAESSRTRTH 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01795 442 SUPERFAMILY Protein kinase-like (PK-like) 116 432 IPR011009 -
Bva11g01795 442 SMART serkin_6 143 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01795 442 Pfam Protein kinase domain 143 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01795 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Bva11g01795 442 PANTHER CASEIN KINASE II SUBUNIT ALPHA 93 434 IPR045216 GO:0004674|GO:0006468
Bva11g01795 442 CDD STKc_CK2_alpha 124 428 IPR045216 GO:0004674|GO:0006468
Bva11g01795 442 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Bva11g01795 442 PANTHER BNAA04G13490D PROTEIN 93 434 - -
Bva11g01795 442 Gene3D Transferase(Phosphotransferase) domain 1 220 428 - -
Bva11g01795 442 ProSiteProfiles Protein kinase domain profile. 143 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01795 442 Gene3D Phosphorylase Kinase; domain 1 143 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01795 Bva-Chr11 15893623 15898727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01795 141 431 Core Cell Cycle Gene Families AT1G76540 30.696 2.40e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bva11g01795 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01795 K03097 - vvi:100262741 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01795 11 15893623 15898727 Bva11g01795 11 15893623 15898727 ECH