Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01793 ATGAGTTGCAACGGTTGCCGTGTTCTTCGAAAGGGTTGCAGCGAGTCCTGTATTCTTCGCCCTTGTTTACAGTGGATCGAGAGCCCTGAAGCTCAAGGCCATGCTACCGTCTTCGTAGCCAAGTTTTTTGGCCGAGCTGGTCTCATGTCTTTCATTTCCAACGTCCCTGAGAACCAAAGACCTGCTCTGTTTCAGTCTTTGTTGTTCGAAGCATGTGGGCGAACGGTGAACCCGGTGAATGGTGCTGTGGGGCTTCTGTGGACGGGAAACTGGCACGTGTGCCAGGCCGCTGTGGAGACGGTGCTCCGTGGTGGCACTTTAAGGCCCATGCCCGAGTTTCTCGGCCTAGATGCTCCTGCTCCGGCCACCGACGAGGCATCCGAAGCGGAGGTTACCTACACGGACATGTGGAGGGTCCGATGTCCGAACCCGAAGACGAATAATTCACGCTCCAATAAGGTTTCTTCGGGCAAACGTCGGCGATCCGATGAGTGCGGGAAGCTCCAAAGCACCGATCTCGATCTCCGATTGACGCCAAGCTTCCAGCAGAAAGTTTCGAGCTACAGCTGCAGACCGGAAATTCGCCGGCCAGGTACGCCGTCGATGAACTCGGAGGAATCTGTGACGACGATGGAGAGTAGCCTTAAGGATCACTACGCTAATGGAGGAGACGGGAAACTTCTCAACCTTTTTACTTG 698 0.5487 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPEFLGLDAPAPATDEASEAEVTYTDMWRVRCPNPKTNNSRSNKVSSGKRRRSDECGKLQSTDLDLRLTPSFQQKVSSYSCRPEIRRPGTPSMNSEESVTTMESSLKDHYANGGDGKLLNLFT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01793 232 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bva11g01793 232 MobiDBLite consensus disorder prediction 140 167 - -
Bva11g01793 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 231 - -
Bva11g01793 232 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bva11g01793 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 231 - -
Bva11g01793 232 MobiDBLite consensus disorder prediction 184 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01793 Bva-Chr11 15883429 15884687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01793 1 231 AS2 family AT3G49940 55.385 1.56e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva11g01793 LOB 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01793 - - gmx:100816189 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01793 11 15883429 15884687 Bva08g00534 08 2747519 2748830 BWGD
Bva08g00534 08 2747519 2748830 Bva11g01793 11 15883429 15884687 ECH
Bva10g00654 10 5631738 5632725 Bva11g01793 11 15883429 15884687 ECH
Bva11g01793 11 15883429 15884687 Bva11g01793 11 15883429 15884687 ECH