Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01791 ATGACGCAATTCACACCGCCACTACCACCTTTGCACCAAATCACTCCCTTTTCCAGCCAAACCATGAGCAAGAATCAGCAAATTCCTAGGACTAGACCCTGGCCTGGATTCTCCACATCCAAGGCCCTTGCTACCACAAGCTTAGGTGATTCCAATTGTATGGAACGGTTACTTGTTCACTGTGCAAATGCTATAGAAAGTAACGATGTCACTCTGGCTCAGCAAATCCTCTGGGTATTGAACAACATAGCAACTCCTGATGGCGACTCCAATCAGCGCCTCGCTTGCAGCTTCCTTCGTGCTCTCACCGCTCGCGCCGCCAAAACTGGTATCTGCAAAATGTTAGCAGCCGTAGCAGAATCCCACACCAACCTCGCTATACAAACCCACAAATTCTCCATCATCGAGCTAGCCAACTTCGTTGACTTAACCCCATGGCACCGTTTCGGTTTCACGGCGGCTAATTCAGCCATTATAGAAGCCACCGAAGGTTTCTCAGTAATCCATATCGTTGACTTGAGCTTGACACATTGCATGCAGATTCCTACGCTTATTGATGCAATTGCTAGCCGACATGAGGTTCCACCTCTCATAAAGCTTACAGTAGCTGGTGCCACCCAAGATATTCCTCCTATGCTTGATCATTCCTACGAGGAATTGGGTACAAAGCTGGTCAATTTCGCTAGGTCTAGGAACGTTGTAATGGAATTTAGAGTGGTTTCTTCGAGTTATGCTGATGGGTTCGCGGCTTTGATCCAACACCTTCGGGTGCAACATTTAGTTTACGCAGCAGAAGGTCATCATCGTCGAAGCGAGGCCCTAGTTATAAACTGTCACATGATGCTTCACTATATTCCTGATGAAACCCTATCAGCAATTCCTGATACGGATTCAGCAAACTATACTTTTGACTCTTGTGCTTTTGCTACTGCTAGTACCACCACTTTGTCGTTACGATCAATGTTTCTTAAAGCGCTGCGGACATTAGATCCAACAGTTGTCGTTTTAGTAGACGAAGATGCAGATTTAACATCGAATAATCTAGTATGCAGATTAAGGTCTGCGTTTAATTATCTGTGGATACCTTATGACACAGTGGATACGTTTCTTCCTAGAGGGAGTAAACAAAGGCAGTGGTATGAAGCTGATATTTGCTGGAAGATCGAGAATGTTATAGCATGTGAAGGGCTTCACAGGGTTGAGAGGGTTGAACCTAAGAGCAGGTGGGAGCAAAGAATGAGAAATGCAAACTTTCAAGGGATTATGTTCAGTGAGGATGCAGTTTCCGAGGTGAAAACGATGCTAGATGAACATGCAGCTGGATGGGGcctaaagaaagaagatgaacATCTTGTGCTCACCTGGAAAGGACACAATGTTGTCTTTGCCTCTGCGTGGATACCTGCTTG 1409 0.4507 MTQFTPPLPPLHQITPFSSQTMSKNQQIPRTRPWPGFSTSKALATTSLGDSNCMERLLVHCANAIESNDVTLAQQILWVLNNIATPDGDSNQRLACSFLRALTARAAKTGICKMLAAVAESHTNLAIQTHKFSIIELANFVDLTPWHRFGFTAANSAIIEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVAGATQDIPPMLDHSYEELGTKLVNFARSRNVVMEFRVVSSSYADGFAALIQHLRVQHLVYAAEGHHRRSEALVINCHMMLHYIPDETLSAIPDTDSANYTFDSCAFATASTTTLSLRSMFLKALRTLDPTVVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIACEGLHRVERVEPKSRWEQRMRNANFQGIMFSEDAVSEVKTMLDEHAAGWGLKKEDEHLVLTWKGHNVVFASAWIPA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01791 469 MobiDBLite consensus disorder prediction 14 37 - -
Bva11g01791 469 Pfam GRAS domain family 55 466 IPR005202 -
Bva11g01791 469 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 467 IPR005202 -
Bva11g01791 469 ProSiteProfiles GRAS family profile. 45 467 IPR005202 -
Bva11g01791 469 PANTHER SCARECROW-LIKE PROTEIN 32 26 467 - -
Bva11g01791 469 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01791 Bva-Chr11 15868880 15870289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01791 22 468 GRAS Transcription Factor Family AT3G49950 55.778 1.92e-173 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva11g01791 GRAS 1.9e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01791 - - rcu:8283347 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01791 11 15868880 15870289 Bva11g01791 11 15868880 15870289 ECH