Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01785 ATGAGATATGCCTACGAGCCAGCAATACTCCTTCGCTTGTCTCTAGTGTGCATCCTCGTCGCCTTGCGCGCGCCTGTTGCGCCCCCTCCCAACCCGCGCCTCCCCTTCCTCCCTATCTCATCCATCGAGACTAAAACCGCCACCACCGTCATCATCGACCACCTCATCAAAACCTATTGCCATAAGCTCGAGATCTCAGATTCCAATAGCCCGGCTATGTCGAAGGCTCGTGTTTACGCAGACGTCAATGTTCATCGCCCCAAAGAGTACTGGGATTATGAGTCTCTCACCGTTCAATGGGGTGATCAAGATGATTACGAGGTTGTGCGGAAAGTAGGAAGGGGAAAATACAGCGAGGTTTTCGAAGGCATAAATGTTAATAGCAAAGAGCGTTGTATAATCAAGATTCTCAAGCCcgtcaagaaaaagaagattaaaagagagataaaaatacTTCAAAACCTTTGTGGGGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGGGATCACCACTCAAAAACTCCTAGCTTAATATTTGAGTATGTCAACAGTAcagattttaaagttttgtaCCCGACCTTGACTGATTATGACATACGCTATTACATATACGAGCTCCTTAAGGCCTTGGATTACTGTCATTCTCAAGGAATCATGCACAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAGTTGCGGAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCtggaaaagaatataatgtTCGTGTGGCTTCaagATATTTTAAGGGGCCTGAACTTCTAGTTGATTTACAAGACTATGACTACTCATTAGACATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTTTATGGTCACGACAACCATGATCAGCTTGTCAAAATTGCCAAGGTGCTTGGGACTGATGAACTTAATGCTTATTTGAATAAGTATCACCTGGAGCTGGACCCTCAACTTGACGCACTTGTCGGAAGGCACAGTCGCAAGCCATGGTCTAAATTTATTAACGCGGATAATCAGCATCTCGTATCTCCGGAGGcaattgattttcttgataAGCTACTTCGATATGATCATCAGGACAGGCTAACCGCAAGAGAAGCAATGGCACATCCATATTTCTCTCAGGTAAGGGCTGCAGAAAGTAGCAGAATGAGGACGCAGTA 1217 0.4207 MRYAYEPAILLRLSLVCILVALRAPVAPPPNPRLPFLPISSIETKTATTVIIDHLIKTYCHKLEISDSNSPAMSKARVYADVNVHRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSKERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDHHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01785 405 Pfam Protein kinase domain 106 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01785 405 ProSiteProfiles Protein kinase domain profile. 106 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01785 405 Gene3D Phosphorylase Kinase; domain 1 106 182 - -
Bva11g01785 405 SUPERFAMILY Protein kinase-like (PK-like) 74 395 IPR011009 -
Bva11g01785 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bva11g01785 405 PANTHER CASEIN KINASE II SUBUNIT ALPHA-3 8 405 - -
Bva11g01785 405 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Bva11g01785 405 PANTHER CASEIN KINASE II SUBUNIT ALPHA 8 405 IPR045216 GO:0004674|GO:0006468
Bva11g01785 405 Gene3D Transferase(Phosphotransferase) domain 1 183 391 - -
Bva11g01785 405 SMART serkin_6 106 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01785 405 CDD STKc_CK2_alpha 87 391 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01785 Bva-Chr11 15836578 15840066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01785 104 391 Core Cell Cycle Gene Families AT1G76540 29.450 9.15e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bva11g01785 Pkinase 1.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01785 K03097 - gmx:100819679 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00541 08 2781638 2785784 Bva11g01785 11 15836578 15840066 BWGD
Bva11g01785 11 15836578 15840066 Bva11g01785 11 15836578 15840066 ECH