Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01776 ATGTTAGAACTGTGGCTAAGGCGACTGGAGATGTGTTTTGGGGGAGGTGGTAACGATGAACTCCTCTGGCATATGGACCTAAAGCATCACGCTTCAGGGGACTATTCAATTGCAGTAGTTCAGGCTAATTCGTCTTTGGAAGACCAAGGACAGGTGTTTACTTCTCCCTCCGCCACGTATGTCGGAGTATACGACGGTCATGGAGGACCTGAAGCTTCCCGTTTCATCACCAACCACCTCTTCCCCCTCCTTCACAAGTTTGCTTTAGAGGAAGGTGAAGTATCAGAGGATGTGATAAAGAAGGCATTTGATGCAACAGAAGAGTTGTTCTTGCATTTAGTGAAGGAATCATGGAGAAGTCGGCCGCAGATTGCTTCGGTGGGGTCATGTTGTCTTGTTGGAGCGATATCGAATAATGTTCTTTATGTGGCAAATCTCGGAGATTCTAGGGCGGTTCTAGGCCGAAAACCATTGGAAGGACATGTAAATTGTCCTGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTAGAGGAGGTCAGGGAGGAAGTTAAGGCTCTTCACCCTGATGATGCACACATCGTGGTTTACTCTCATGGCGTTTGGCGTATCAAAGGCATTATTCAGGTCTCAAGATCAATTGGAGATTTTTTCCTAAAGAAACCTGAGTTTAATAATGATCCTCTATTCCAACAATTTGGATATCCAGTGCCTTTAAAGAGACCTGTAGTGACAGCTGAACCATCCATATTAAAGCGGAAGCTGAAGCCAGAGGACTTGTTTGTGGTATTTGCATCAGATGGACTTTGGGAACATTTAACTGATGAAGTGGCTGTTGATATCATCTTCAGAAGTCCAAGAATAGGAGTAGCGAAACGGTTGGTGAGAGCTGCACTTGAAGAGGctgcaagaaaaagagaaatgagtTACGaggatttgaagaaaaaggagaaaggcGTAAGGCGCTATTACCATGATGATATCATAGTGATTGTGATATACCTAGATCATTCACGAGATCCTCTGTATGGTAGATCGGAAGATGACGGCAGCTACAGCTGCACTAGTGCACCAGTTGATATTTTCTCCCTCAATGCAGGTGAAGCTGATCTCTA 1121 0.4318 MLELWLRRLEMCFGGGGNDELLWHMDLKHHASGDYSIAVVQANSSLEDQGQVFTSPSATYVGVYDGHGGPEASRFITNHLFPLLHKFALEEGEVSEDVIKKAFDATEELFLHLVKESWRSRPQIASVGSCCLVGAISNNVLYVANLGDSRAVLGRKPLEGHVNCPVVAERLSTDHNVGVEEVREEVKALHPDDAHIVVYSHGVWRIKGIIQVSRSIGDFFLKKPEFNNDPLFQQFGYPVPLKRPVVTAEPSILKRKLKPEDLFVVFASDGLWEHLTDEVAVDIIFRSPRIGVAKRLVRAALEEAARKREMSYEDLKKKEKGVRRYYHDDIIVIVIYLDHSRDPLYGRSEDDGSYSCTSAPVDIFSLNAGEADL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01776 373 Gene3D - 23 342 IPR036457 -
Bva11g01776 373 PANTHER ALPHABET, ISOFORM E-RELATED 5 372 - -
Bva11g01776 373 SUPERFAMILY PP2C-like 40 339 IPR036457 -
Bva11g01776 373 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Bva11g01776 373 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 5 372 - -
Bva11g01776 373 SMART PP2C_4 26 335 IPR001932 -
Bva11g01776 373 CDD PP2Cc 41 337 IPR001932 -
Bva11g01776 373 Pfam Protein phosphatase 2C 56 305 IPR001932 -
Bva11g01776 373 ProSiteProfiles PPM-type phosphatase domain profile. 34 337 IPR001932 -
Bva11g01776 373 Coils Coil 298 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01776 Bva-Chr11 15798903 15801470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01776 16 341 PP2C-type Phosphatase Gene Family AT3G51370 53.892 9.65e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01776 - K01102 gmx:100802394 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01776 11 15798903 15801470 Bva11g01776 11 15798903 15801470 ECH