Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01766 ATGCCTCCTCAAGATCAAGAACAACCCCTATTAATCGACTCACGGCAAGAGGAGCTAGAAGAAACAGCTTATGATTCCTCCGAGAAGATCGTGATCGTCGGAATAGACGATGCAGACCTCGACGATTGTTCTCGAGCGCCACCGTTCTCATGGAGAAAGCTCTGGTTATTTACCGGACCTGGTTTTCTTATGAGTATTGCATTTTTGGATCCTGGAAATCTGGAAGGAGATCTTCAGTCCGGTGCAATTGCTGGGTATTCGCTGCTATGGCTGCTTATGTGGGCCACAGCCATCGGTCTTCTGGTTCAGCTTTTGTCAGCGCGGCTTGGAGTAGCAACTGGAAAACACCTCGCTGAATTATGCAGAGAGGAGTACCCTACTTGGGCTAGGATAGTGCTATGGGTGATGACAGAATTTGCTCTAATTGGAGCGGACATTCAAGAGGTTATTGGAAGCGCTATTGCTATAAGGATTCTAAGTAATGGATTTATTCCTCTTTGGGCAGGGGTCACCATTACAGCTTGTGATTGTTTTATATTTCTGTTTCTTGAGAACTATGGTGTGAGGAAACTGGAAGCATTTTTCGCTGTTCTTATTGCTATGATGGCAATATCATTTGCATGGATGTTTGGTGAAACAAAACCAAGTGGCACAGATCTTCTTCTCGGTATTTTAATTCCTAAACTTAGCTCCAAAACAATACAGCAGGCTGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAACGTATTCTTGCACTCTGCGCTTGTTCAATCAAGGCAAATTGACCGCAGCAAGAAAGGCCGAGTTCAAGAAGCTCTTAACTATTACTCCATAGAGTCTGCTGCTGCCCTTGTGgtctcttttataattaacttatttgTCACAACTGTGTTTGCTAAGTCTTTCTATGGTACTGAACTAGCAAATAACATTGGCCTTGTTAATGCGGGGCAGTATCTTCAGGAGATGTATGGGGGTGGACTTTTCCCAATCTTATATATTTGGGGCATTGGGTTATTAGCAGCTGGCCAAAGTAGCACTATTACTGGCACTTATGCTGGACAATTCATCATGGGAGGTTTCCTAAACTTAAGGTTGAAAAAATGGATAAGGGCGTTAATTACACGAAGTTTTGCTATCATTCCAACCATGATAGTTGCTCTTGTCTTTGATACCTCAGAAGACTCATTAGATGTTCTAAATGAATGGCTTAATGTGCTCCAGTCAGTTCAGATCCCTTTTGCTCTTATTCCCTTACTTTGTTTAGTGTCGAAGGAGCGGATAATGGGCACTTTCAAAATCGGCTCTGTCCTTAAGATTATTTCATGGCTCGTGGCTGCCCTAGTGATAGTAATAAATGGCTATTTATTGGTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGCACTTGGCACTGTAGTATGCGCCTTCACAGCTGCATATGTTGCATTTATACTCTACCTTATCTCTCGGGCCATTACCTTCTCTTCTTGGCTAAATTTAACGCAGTCAAAGACAACAAAcacagaaaattg 1538 0.4213 MPPQDQEQPLLIDSRQEELEETAYDSSEKIVIVGIDDADLDDCSRAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATAIGLLVQLLSARLGVATGKHLAELCREEYPTWARIVLWVMTEFALIGADIQEVIGSAIAIRILSNGFIPLWAGVTITACDCFIFLFLENYGVRKLEAFFAVLIAMMAISFAWMFGETKPSGTDLLLGILIPKLSSKTIQQAVGVVGCIIMPHNVFLHSALVQSRQIDRSKKGRVQEALNYYSIESAAALVVSFIINLFVTTVFAKSFYGTELANNIGLVNAGQYLQEMYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWIRALITRSFAIIPTMIVALVFDTSEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKERIMGTFKIGSVLKIISWLVAALVIVINGYLLVEFFSSEVNGAALGTVVCAFTAAYVAFILYLISRAITFSSWLNLTQSKTTNTEN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01766 512 Pfam Natural resistance-associated macrophage protein 75 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 Hamap Divalent metal cation transporter MntH [mntH]. 35 462 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 188 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 344 363 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 406 425 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 133 159 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 237 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 372 389 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PRINTS Natural resistance-associated macrophage protein signature 163 182 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 14 510 - -
Bva11g01766 512 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 14 510 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva11g01766 512 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 52 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01766 Bva-Chr11 15743811 15747429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01766 1 499 Inorganic Solute Cotransporters AT2G23150 76.693 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01766 K21398 - gmx:100789871 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01766 11 15743811 15747429 Bva11g01766 11 15743811 15747429 ECH