Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01764 ATGACTTTCTGCAGGGAAGGAGTTGATATATTACCAAACAACACGCAAGGTGTTGATGGTGGATCCAATAACACTGAAAGTGTGCCTGAAGAGGATAACTCAAGGGAATGGTTGAGTTTAGGACTCAATGGAGACATGTCTGTTGCAGCTGAAAACCCAGAGTCCCCGTCAAAACCTGGCAACAATAAGTTATTCTCTTGCAATTTCTGCATAAGAAAGTTTTATAGCTCACAAGCCTTGGGTGGTCACCAGAATGCCCACAAGAGGGAAAGAGGAGCAGCTAGAAGGTACCAATCTCATAGGATGATCATGACATCAACGGGATTTCCATCCACATCTCTAGCAGCGAGGTCATTGGGTGTGCAGCCACACTCGCATGTGCACAAGCCAACAAGAGCAAGCTCTTCTATGGTTGCTAGATTTAGTGATTCCAATTCTGGGTTTGGAATGGCTTGGACACCCTTTATGCTAGAACAACCCATGGCTTTGATTTGGCCAGGCAGCTTTCGGGTGGACAACTTGCACAAGCAAGAATTGGTTGTAAATAAACTCGATTTGGATCTTCGACTGTG 572 0.4528 MTFCREGVDILPNNTQGVDGGSNNTESVPEEDNSREWLSLGLNGDMSVAAENPESPSKPGNNKLFSCNFCIRKFYSSQALGGHQNAHKRERGAARRYQSHRMIMTSTGFPSTSLAARSLGVQPHSHVHKPTRASSSMVARFSDSNSGFGMAWTPFMLEQPMALIWPGSFRVDNLHKQELVVNKLDLDLRL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01764 190 MobiDBLite consensus disorder prediction 11 34 - -
Bva11g01764 190 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Bva11g01764 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Bva11g01764 190 Gene3D Classic Zinc Finger 45 115 - -
Bva11g01764 190 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 190 - -
Bva11g01764 190 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 190 - -
Bva11g01764 190 SUPERFAMILY beta-beta-alpha zinc fingers 61 91 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01764 Bva-Chr11 15727139 15728158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01764 15 170 C2H2 Transcription Factor Family AT1G24625 36.875 3.33e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01764 - - tcc:18611223 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00558 08 2868784 2869915 Bva11g01764 11 15727139 15728158 ECH
Bva11g01764 11 15727139 15728158 Bva11g01764 11 15727139 15728158 ECH