Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01753 ATGGAAACCATCCCTTATACAATCCCTTCCACCAAATTCCAATCACTTCTTTTATTCAGAACTGGTAAATTAAATCGATCCTGCAATTCCATTCTCCACCAAATCCAACCCTTCCTCTCTTATTCAGTTTCAATCAAATCCTCATATTGTTATTCTAGCAAAATTCGTAGTCCTCGTCACCGCACACTACGTTGTCTCGCTGAATCCAGTACTAACCACCACCACCACGGTGATCATACTCATCATgaccaccaccaccatcatCACCACTTTGATTGCAACGATTATGCTAATCTTCCTGCACCCCAGAGAGCGATTTTGGCATTTGCTAAAGCCACCAGGTGGATCGACTTGGCAAACTTCTTGAGGGAGCATATGCAATTATGTTGCTGTTCTGCGGCTTTATTTGTGGCCGCTGCCATTTGTCCTTACGCTTTGCCAAAGCCCAGGCCTTTTCAAAATGCTCTCATTTTCATTGCTTTTCCTTTAGTTGGGGTTTCTGCATCACTCGATGCTCTGCTTGAAATTACTAGTGGAAAAGTCAACATCCATGTATTGATGGCTCTGGCAGCCTTTGCATCAGTTTTTATGGGTAACTCTTTGGAAGGGGGGTTACTTCTTGCCATGTTCAATCTAGCGCACATAGCTGAGGAGTATTTCACCAGTCGTTCCATGGTTGACGTTAAAGagttaaaggaaaataatccAGATTTTGCCCTCGTTCTGGATACTACTAGTGGTGAACTTCCTAATACCTTTGACTTGGCATACAGGAGGGTTCCTGTGCATGATGTAACAGTAGGCTCCTATATCTTGGTCGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGGAGCGCCACAATTACGATCGAGCACTTGACGGGAGAAGTCAAACCATTGGAGGCCAAAGTTGCAGATAGGATTCCTGGTGGTGCAAGGAACTTAGATGGCAGGATAATAGTGAAGgCAACAAAGACTTGGAAGGAATCGACTCTCAACAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAAACCAAAGCTTCAGAGGTGGCTGGATGAATTTGGCGAGCGCTACAGCAAAGTGGTTGTGGTTTTATCAGTTGCTATTGCTGTCATTGGACCACTCATTTTTAAGTGGCCTTTCTTTAGTACACCAGCTTGCAGAGGATCAGTTTATAGAGCTCTGGGACTCATGGTGGCAGCATCACCATGTGCCTTGGCTGTGGCTCCATTGGCATATGCTACAGCAATCAGCTCCTGTGCAAAGAAGGGTATACTGCTCAAGGGTGGACACGTTCTAGATGCTCTAGCTTCTTGTCAAACTATTGCTTTTGACAAAACAGGAACATTAACAACTGGTGGACTTGCTTTCAAGGCAATGGAACCAATTTATGGTCATAGCATTGGCAACACcagatcaaaattttcttcctgttGCACTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCGGCCATGGAAAAGGGTAACACTCATCCCATTGGAAGGGCTGTGGTTGACTACAGTGAGGGCAAAGACCTCCCATCTGTTGCGGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGTCTCATTGCTACTCTCAACAGCAGTGAGtCAGGAACTGGCGGGGCTAAGCTGTTGAAAGCATCACTTGGGTCTGTGGATTTTATCACTTCATTTTGTCAGTCTGAAGATGAATCAAGAAAGATCAGGGAAGCTGTTAATTCATCTTCTTATGGGAGTGAATTCGTTCATGCTGCCCTTTCAGTCAATGAAAAGGTAACACTAATTCACCTAGAGGATAGACCTCGTCCTGGGGTTTCAAACGTCATACGGGAATTGCAAGATCAAGCAAGGTTTCGTGTGATGATGTTAACTGGTGATCATGAGTCCAGTGCAAGGAGAGTTGCAACTGCTGTAGGTATCAATGAGGTTTATTGCAGCCTTAAACCTGAGGATAAGCTTAGTCATGTAAAGGACATCTCAAGGGATATAGGGGGAGGTTTAATAATGGTCGGTGAAGGTATCAATGATGCCCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCGGCGTGCTAGTGCCACTGCCATAGCTGTTGCAGACGTCCTATTGCTCCGAGAAAATATCACTGCAGTTCCATTTTGTATTGCAAAGGCTCGCCAAACAACTTCACTCATCAAACAAAGTGTGGCCCTGGCATTATCCTGCATTGTCATGGCCTCTCTTCCGTCTGTTTTGGGATTTTTGCCACTGTGGTTGACGGTTCTTTTACATGAAGGTGGAACCCTTCTTGTTTGCCTCAATTCTATACGTGCCCTGAACGAACCAACTTGGTCCTGGAAGCAGGATTTACTACAACTGTTTAACGAAGGTAAATCTAGAGTGCTGTCACTAGGAACAGATAACGTCAGCTCGAGCACCATCAATGCCGCAAACGTGTA 2471 0.4403 METIPYTIPSTKFQSLLLFRTGKLNRSCNSILHQIQPFLSYSVSIKSSYCYSSKIRSPRHRTLRCLAESSTNHHHHGDHTHHDHHHHHHHFDCNDYANLPAPQRAILAFAKATRWIDLANFLREHMQLCCCSAALFVAAAICPYALPKPRPFQNALIFIAFPLVGVSASLDALLEITSGKVNIHVLMALAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENNPDFALVLDTTSGELPNTFDLAYRRVPVHDVTVGSYILVGAGESVPVDCEVFQGSATITIEHLTGEVKPLEAKVADRIPGGARNLDGRIIVKATKTWKESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAVIGPLIFKWPFFSTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCQTIAFDKTGTLTTGGLAFKAMEPIYGHSIGNTRSKFSSCCTPSCEKEALAVAAAMEKGNTHPIGRAVVDYSEGKDLPSVAVESFEYFPGRGLIATLNSSESGTGGAKLLKASLGSVDFITSFCQSEDESRKIREAVNSSSYGSEFVHAALSVNEKVTLIHLEDRPRPGVSNVIRELQDQARFRVMMLTGDHESSARRVATAVGINEVYCSLKPEDKLSHVKDISRDIGGGLIMVGEGINDAPALAAATVGIVLARRASATAIAVADVLLLRENITAVPFCIAKARQTTSLIKQSVALALSCIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPTWSWKQDLLQLFNEGKSRVLSLGTDNVSSSTINAANV 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01753 823 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED 52 821 - -
Bva11g01753 823 SUPERFAMILY Calcium ATPase, transduction domain A 257 342 IPR008250 -
Bva11g01753 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 257 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01753 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 583 759 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva11g01753 823 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Bva11g01753 823 SUPERFAMILY Calcium ATPase, transmembrane domain M 185 765 IPR023298 -
Bva11g01753 823 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 781 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva11g01753 823 Pfam E1-E2 ATPase 257 429 - -
Bva11g01753 823 Gene3D - 221 347 - -
Bva11g01753 823 SFLD Haloacid Dehalogenase 431 732 - -
Bva11g01753 823 Pfam haloacid dehalogenase-like hydrolase 446 692 - -
Bva11g01753 823 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Bva11g01753 823 PRINTS P-type cation-transporting ATPase superfamily signature 625 635 - -
Bva11g01753 823 PRINTS P-type cation-transporting ATPase superfamily signature 679 698 - -
Bva11g01753 823 PRINTS P-type cation-transporting ATPase superfamily signature 703 715 - -
Bva11g01753 823 PRINTS P-type cation-transporting ATPase superfamily signature 602 613 - -
Bva11g01753 823 CDD P-type_ATPase_HM 128 781 - -
Bva11g01753 823 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 52 821 - -
Bva11g01753 823 SUPERFAMILY HAD-like 447 779 IPR036412 -
Bva11g01753 823 Gene3D - 460 610 IPR023299 GO:0000166
Bva11g01753 823 Gene3D - 442 729 IPR023214 -
Bva11g01753 823 SFLD p-type atpase 431 732 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01753 Bva-Chr11 15672726 15681857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01753 102 804 Primary Pumps ATPases AT4G37270 76.312 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01753 K01534 - gmx:100776309 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01753 11 15672726 15681857 Bva11g01753 11 15672726 15681857 ECH