Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01752 ATGAGGATGGCGCCTAGTAGAAAGGAAGTCGATCGGATCAAAGGCCCTTGGAGTCCCGAAGAGGATGATGCTCTACAGAAGCTGGTAGAGAAGCACGGACCCAGGAACTGGTCCTTGATCAGCAAATCCATTCCTGGTCGTTCTGGGAAATCCTGCAGGCTTCGTTGGTGTAATCAGCTATCTCCTCAGGTGGAGCACCGCGCCTTCTCACCAGAAGAGGACGAAACCATCATCAGAGCACATGCCCGTTTCGGCAACAAGTGGGCCACCATCGCCCGTCTTCTATCTGGGCGCACCGATAACGCTATCAAGAACCACTGGAACTCCACCTTGAAGCGCAAGTGCTCTTCCATGATGATCGATGAAAATGGCGTCGGTGTAGCTGGCTTCGATAGCAGTTATGGCCAGCCACCTCTCAAGAGGTCAGTTAGTGCTGGCGCTGCTATTCCTGTCTCCACTGGGCTTTATATGAACCCATCCTCTCCGGGTAGCCCATCGGGATCCGATGTCAGCAATTCCAGTCTTCCTGTTGTGTCTTCTTCCCATGTATACCGACCTGTTCCTCGAACCGGCGGGGTTCTACCTCCTGTAGAAACAACGTCATCTTCTAACGATCCTCCAACATCATTATCGTTGTCCCTGCCTGGTGTAGATTCCTGCGAGGTGTCGAATTGGCCTACAGAGTCAATAAACACAGTGCCACTGTCCAACACCATGCCTTTGTTACCAGTGGTGGCCCCAACTCCAGCTGCGACTACAACCCCGGCGCAGGCCCCTTCGGCAGCTACGATGTCGATGCAAAATCTGCTCCAGCTGGGTCGTGATGATCGGGGCGGTGAGGGTGGTTCATCGTCGGCTGTGACCCAAAAGGCTTTCGCACAGGTGCCATTGAATCTCAGTTCTGAGCTGCTAGCGGTGATGCAGGACATGATAAGGAAGGAGGTGAGGAATTATATGGCGGAGCAGAATGGCAAGTGTTTTCAGGCAGCCGATGGCTTTAGGAACGCTTCGGTGAAGCGTATCGGGATTAGCAGGATCGATTCGTA 1046 0.5344 MRMAPSRKEVDRIKGPWSPEEDDALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMMIDENGVGVAGFDSSYGQPPLKRSVSAGAAIPVSTGLYMNPSSPGSPSGSDVSNSSLPVVSSSHVYRPVPRTGGVLPPVETTSSSNDPPTSLSLSLPGVDSCEVSNWPTESINTVPLSNTMPLLPVVAPTPAATTTPAQAPSAATMSMQNLLQLGRDDRGGEGGSSSAVTQKAFAQVPLNLSSELLAVMQDMIRKEVRNYMAEQNGKCFQAADGFRNASVKRIGISRIDS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01752 348 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bva11g01752 348 MobiDBLite consensus disorder prediction 182 211 - -
Bva11g01752 348 PANTHER MYB PROTEIN-RELATED 5 241 - -
Bva11g01752 348 CDD SANT 68 111 IPR001005 -
Bva11g01752 348 Gene3D - 13 65 - -
Bva11g01752 348 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 5 241 - -
Bva11g01752 348 Gene3D - 67 124 - -
Bva11g01752 348 MobiDBLite consensus disorder prediction 195 211 - -
Bva11g01752 348 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Bva11g01752 348 SMART sant 13 62 IPR001005 -
Bva11g01752 348 SMART sant 65 113 IPR001005 -
Bva11g01752 348 Pfam Myb-like DNA-binding domain 17 75 - -
Bva11g01752 348 MobiDBLite consensus disorder prediction 1 21 - -
Bva11g01752 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Bva11g01752 348 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Bva11g01752 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Bva11g01752 348 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01752 Bva-Chr11 15670346 15671962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01752 5 347 MYB Transcription Factor Family AT4G37260 50.959 4.19e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g01752 Myb_DNA-bind_6 5.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01752 K09422 - zju:107403527 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01752 11 15670346 15671962 Bva08g00569 08 2926077 2927511 BWGD
Bva08g00569 08 2926077 2927511 Bva11g01752 11 15670346 15671962 ECH
Bva11g01752 11 15670346 15671962 Bva11g01752 11 15670346 15671962 ECH