Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01743 ATGGACGAGAAAATAGACACCGCAGAGAAAAAGGTGCTGGTTGATATTGTAAAATTGCTTCAGAAAAGAGGAATAAAAGGTAGCCAAGGAGGTTGGAAAGAATTCTTAAACAGTTATGATAGAAAGTTTGGGGCTAGCTTGAGTGATCCAACAAAGAGGTCCCATGAGGTATTGGCTGCATTTATAAAGACATTTTCAAAGGAGGATGATTTGAAGTTTATTGGTAACGTATTGCGACGCCATTCAAATCAAGAAATATTGGAGcaattgaaagagaaatcTTATGATACCTCTGAGCAGAGGTTAGTCCAAGTAACTCTCCGGCATCCATTGTATCCATTGGATTATTCATTTGCATCACTTGATGAGGACTGGGTGattataaatcttaagaaaaaatcaaaggtGATGAGATCTACTGCAATGGTTGCTGTTGATTGTGAAATGGTTCTATGTGAAGATGGCACTGAAGCGGTAGTTAAAGTTTGTGTGGTGGACCGAAATTCAGAGGTCAAACTACATGAATTTGTAAAACCCAGCAAAGCAATTGCAGACTACAGAACAGAGATTACTGGCATCTCTGCTCAAGATCTTGAGGGAATCACTTGCTCTTTGGCAGATATACAGAAATCCATGAAGAAGTTGTTATCAAATGGAACCATATTAGTGGGACACAGTTTACATAATGACCTACATGCGTTGAAGCTAGACTACGTCAGAGTGATCGATACTTCCTACATCTTCCAATGCTCGGATGGGCCTATCCACAAGAGACCttctttgaataatttatgcaAGGCTGTGTTGGGTTATGAAGTGCGGAAAAAATGTGCTCCACATAATTGTCTAGATGATGCACACGCAGCAATGAAACTTGTTCTTGCTATGATAGAACAGGGGGTTGATAAACTTACTCCCTTGGTTCAAGAGCATATTCTTGAATGTGAGATGACAAAGCTTCTTATTCACAACATACCAACAAGTGTGAAAAGTGATGAACTGCATAAAGTTGTTCCCGGAGACTTCACAATGGAAGTGAAGCCTTCTAAGAAAGTTCATGGAGACAAATATTCTGCCATTGCCATCTTTAGTAATCAGCGAGAGGCAGATGACGCCTATGAAAGTGTCGAAGGCAGCGAAGAAAAGGATTCATCTGGACGTCGGCAGAAACTTGTAACATTTCAACTCAGCACAGGTGTGACTACCTCTATATATGTTCGAAAAATGGTACCTGAAGGTCCCCATGTTCAATCTCGTAATAAGAGAGCTTTGCAAGTGGACGAGACATTTGTCGTTTGTAAGAAAGTAAAGAACGATCATAAAACGGATGAGTCTGCCACGACAGCCTCAAATCAGTGTGATGCTCACTTGAATGAGATTAAAGCTCGGAACGGACGAGTGAAGAAGAGTGACGAGGTGGATGAGTCTTCCATGACTGCCTCAAATCAGAGTGATGCCCATTTGAATGAGATTAAAGCTCTGAATGAACGACTGAAAAAGATTGACGAGGAAAATGAATCGTTGAGACAACAGTTGAAACAAAAGGATTTTGAGATCTCCGTGCTGAATAAAATGGTATCAAACTTGAGAAAGGGAACAAAATA 1604 0.3928 MDEKIDTAEKKVLVDIVKLLQKRGIKGSQGGWKEFLNSYDRKFGASLSDPTKRSHEVLAAFIKTFSKEDDLKFIGNVLRRHSNQEILEQLKEKSYDTSEQRLVQVTLRHPLYPLDYSFASLDEDWVIINLKKKSKVMRSTAMVAVDCEMVLCEDGTEAVVKVCVVDRNSEVKLHEFVKPSKAIADYRTEITGISAQDLEGITCSLADIQKSMKKLLSNGTILVGHSLHNDLHALKLDYVRVIDTSYIFQCSDGPIHKRPSLNNLCKAVLGYEVRKKCAPHNCLDDAHAAMKLVLAMIEQGVDKLTPLVQEHILECEMTKLLIHNIPTSVKSDELHKVVPGDFTMEVKPSKKVHGDKYSAIAIFSNQREADDAYESVEGSEEKDSSGRRQKLVTFQLSTGVTTSIYVRKMVPEGPHVQSRNKRALQVDETFVVCKKVKNDHKTDESATTASNQCDAHLNEIKARNGRVKKSDEVDESSMTASNQSDAHLNEIKALNERLKKIDEENESLRQQLKQKDFEISVLNKMVSNLRKGTK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01743 534 Coils Coil 484 518 - -
Bva11g01743 534 Pfam Exonuclease 143 292 IPR013520 -
Bva11g01743 534 PANTHER SMALL RNA DEGRADING NUCLEASE 1-RELATED 1 412 - -
Bva11g01743 534 SMART exoiiiendus 141 302 IPR013520 -
Bva11g01743 534 SUPERFAMILY Ribonuclease H-like 142 301 IPR012337 -
Bva11g01743 534 CDD REX1_like 143 294 IPR034922 -
Bva11g01743 534 Gene3D - 137 320 IPR036397 GO:0003676
Bva11g01743 534 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01743 Bva-Chr11 15624662 15630541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01743 138 299 C2H2 Transcription Factor Family AT3G27970 32.787 1.06e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01743 K14570 - gmx:100785565 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01743 11 15624662 15630541 Bva11g01743 11 15624662 15630541 ECH