Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01742 ATGGAACCAGTTTCTGCTGACTCATCGTCAAAACCAACATCTTCAGCTTCTGACATAGAACATCATCCCCCCAGCGTCTCTGGTCAAAGTACCAATGCGAAGGACTCACCATCCTTTTTATCTACTTCCAGTGTATCATCCTGGACACGGAATCTGAAATTTTTGCAGCCACTTGGAGCAACGCCAGAACACTCGCATAATGGAAATACTGGGATGTCAGTACTTTCAAGCCTGACTAGTGGGATTGCATTGAAAATACCGCCGATGCCTCCTGTACAAAAAGAGACAGTTCAAGCCAGTTCAGGGGCGGAGGAACCTAGTCTTATCGAATCATTCACCAAAGGGTTAGTTGACTCATCTAAGAGTGCAGTAAAGGCCATGCAGATTAAGGCACGTCATTTTGTCTCTCAAAACAACAGTAGATATCAGGAAGAAGGCTTTGATTTGGATATGACATACAttactgaaaatataattGCTATGGGATTTCCAGGTGGTGACTTCAGCTCTGgaattttgggattttttgagGGTTTCTACCGCAACCATATGGAAGAAGTGATCAAGTTTTTTGAAACTCATCACAAGGGAAAGTTCAAAGTGTACAATCTTTGTTCAGAGAGGTTGTATGATGTATCACTTTTCCAGGGGAAGGTTGCAAGTTTCCCATTTGATGATCATAATTGCCCTCCAGTTCAACTTATAGCATCATTTTGTCAAAGTGCCTATTCATGGTTGAAGGAGGATATTCAAAATGTAGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGAACAGGATTGATGATTTGTAGCCTACTTTTGTTCCTTAAGTTCTTCCCAACTGCTGAGGAGGCCATTGATTACTATAACAAAAGAAGATGTACAGATGGGAAGGCCCTACATAATCCTTCTCAGATTAGGTATGTCAAATATTATGAGCGGACTTTAACATACTTCAATGGAAAAGTTCAGCCTGGACGAAGGTGCATGCTGAGAGGGTTTCGACTTCAAAAATGCCCTTATTGGATTAGACCATCCATTACAATATCCGATCATAATGGAATTCTTTTCACCTCAAGGAAGCATCCAAAAACGAAGGATCTAATGCCGGAAGATTTTTGGATCAGTACCGCAAAAAAAGGAGTTCTGGTATTTGCACTACCGGGGGAGCCTGGTCTGGCAGAGCTTGTTGGGGacttcaaaattcattttcatgatCGGCAAGGAGATTTGTACTGTTGGTTAAATACGAACATGATTGAAAACCGAACAACTCTAGAGGCCTCTGATCTTGATGGCTTTGACAAGAGAAAAATTCCTGCTCCAGGATTGCAGGTCGATATTTTGATGATAGACTATGACGGCACCCTGCCTACAAGGACAAAAGCAAATCCCGCTGGCAAAGGATCTGGTGGAAGTACAGGCAAAGGCAATGTCCCAGCCTCGGGTGCAAGGCATACATCTAACTCTGAAATCTCTAAAAATGGAGATGATGATGTATTCTCGGATAGCGATGAGGAGACTCGGGTTTCAGAATGCAGGAAAACTCAAGCTGAATCTGGACCCGGATTTGTGGCACCTCCTCCAGACCATATCGGAGCCTTGACACGTAGAACGGATGAAGAACGACATGCTACATCAAAAGAATTAACTACTACTACTGGTGAAGTTCAGAGAACTTCTTCAGGCCTTGGGACCACTAGCGCGCAATCTGTAGGGGAAAGTGAATTCAAGGCCATGGCTGCCGATGCTTCAGTTTTTACTTTCGGAGAAGAAGAGGATTTTGATAGCGATTG 1796 0.4226 MEPVSADSSSKPTSSASDIEHHPPSVSGQSTNAKDSPSFLSTSSVSSWTRNLKFLQPLGATPEHSHNGNTGMSVLSSLTSGIALKIPPMPPVQKETVQASSGAEEPSLIESFTKGLVDSSKSAVKAMQIKARHFVSQNNSRYQEEGFDLDMTYITENIIAMGFPGGDFSSGILGFFEGFYRNHMEEVIKFFETHHKGKFKVYNLCSERLYDVSLFQGKVASFPFDDHNCPPVQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLFLKFFPTAEEAIDYYNKRRCTDGKALHNPSQIRYVKYYERTLTYFNGKVQPGRRCMLRGFRLQKCPYWIRPSITISDHNGILFTSRKHPKTKDLMPEDFWISTAKKGVLVFALPGEPGLAELVGDFKIHFHDRQGDLYCWLNTNMIENRTTLEASDLDGFDKRKIPAPGLQVDILMIDYDGTLPTRTKANPAGKGSGGSTGKGNVPASGARHTSNSEISKNGDDDVFSDSDEETRVSECRKTQAESGPGFVAPPPDHIGALTRRTDEERHATSKELTTTTGEVQRTSSGLGTTSAQSVGESEFKAMAADASVFTFGEEEDFDSD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01742 598 ProSiteProfiles Phosphatase tensin-type domain profile. 140 319 IPR029023 -
Bva11g01742 598 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 10 598 - -
Bva11g01742 598 MobiDBLite consensus disorder prediction 1 42 - -
Bva11g01742 598 MobiDBLite consensus disorder prediction 550 570 - -
Bva11g01742 598 MobiDBLite consensus disorder prediction 475 490 - -
Bva11g01742 598 ProSiteProfiles C2 tensin-type domain profile. 326 453 IPR014020 -
Bva11g01742 598 SMART PTEN_C2_2 324 452 IPR014020 -
Bva11g01742 598 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 254 293 IPR000387 GO:0016311|GO:0016791
Bva11g01742 598 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Bva11g01742 598 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 10 598 - -
Bva11g01742 598 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 316 IPR029021 -
Bva11g01742 598 MobiDBLite consensus disorder prediction 534 549 - -
Bva11g01742 598 MobiDBLite consensus disorder prediction 460 570 - -
Bva11g01742 598 CDD PTP_PTEN 150 314 IPR045101 GO:0016791
Bva11g01742 598 Gene3D Protein tyrosine phosphatase superfamily 125 322 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01742 Bva-Chr11 15616630 15623787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01742 27 598 Protein tyrosine phosphatase (PTP) family AT3G19420 59.278 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01742 K01110 - gmx:100801622 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00577 08 2978724 2982437 Bva11g01742 11 15616630 15623787 ECH
Bva11g01742 11 15616630 15623787 Bva11g01742 11 15616630 15623787 ECH