Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01738 ATGGCCGTGGAGCTCATGATGGGTTATAGAAACGATAATTTCACAGCCAAAGGCGAAGAGAATGCTGTTCAAGAAGCAGCATCTGGGTTAGAGAGCGTTGAGAAGCTCATCAGGTTGCTTTCTCAGAATCAACAACAATTACAGtcatcttcaacttcaaaatcTTCCATGGAAATGGAGATGGTTGCAGACGCCGCCGTTTCCAAGTTCAAGAAGGTAATTTCACTTCTGGGTCGAACTAGAACCGGCCACGCTCGCTTTAGAAGAGCCCCTTTGGCTCCACCTGTTCATCACACCCCGGAAACTCAACCTTCTGAACCCAAAGTTTATTATGCGACTCCGTTGCAGCAGATCCCACCAACCCATCATCAACACCAGACACACAGCGACCACTGTTTGATCCCAAAAAATGGGGTCATTGAGAGGAAAGACTCGTCCAAGAGCATCAATTTCTCATATTCCTCTGCTGCAAATTCATTCATATCGTCTCTCACTGGCGGTACTGATAGTATACAGCCGTCATCTTCGTCGCCGGCAACAGCTTTCCAGATCACAAATCTATCTCAGGTCTCTTCAGCCGGAAAGCCTCCACTTTCCTCGTCTTCATTGAAGAGGAAGTGTAGCTCGGAAAATTTAGGTTCAGGCAAGTGCGGTAGTTCCTCCGGCCGCTGCCATTGTTCAAAAAAGAGTAGAAAAATGAGATTGAAGAGGGTGGTCAGGGTGCCAGCAATAAGCTTGAAGATGGCTGATATTCCACCCGACGATTATTCTTGGAGAAAGTACGGGCAGAAACCTATCAAGGGATCCCCTCATCCAAGGGGTTACTACAAGTGCAGCAGCGTGAGAGGGTGTCCAGCGCGCAAACACGTAGAGAGAGCTCTGGACGACCCATCTATGCTAGTAGTTACCTACGAAGGAGAGCACAATCACTCGCTCTCTGCGGCCGAAACCAGTAATCTTATCCTAGAATCTTCTTA 977 0.4719 MAVELMMGYRNDNFTAKGEENAVQEAASGLESVEKLIRLLSQNQQQLQSSSTSKSSMEMEMVADAAVSKFKKVISLLGRTRTGHARFRRAPLAPPVHHTPETQPSEPKVYYATPLQQIPPTHHQHQTHSDHCLIPKNGVIERKDSSKSINFSYSSAANSFISSLTGGTDSIQPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSGRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAAETSNLILESS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01738 325 Pfam Plant zinc cluster domain 204 250 IPR018872 -
Bva11g01738 325 Gene3D WRKY domain 237 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g01738 325 SUPERFAMILY WRKY DNA-binding domain 249 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g01738 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 325 IPR044810 GO:0003700
Bva11g01738 325 MobiDBLite consensus disorder prediction 188 224 - -
Bva11g01738 325 Pfam WRKY DNA -binding domain 254 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g01738 325 Coils Coil 30 50 - -
Bva11g01738 325 ProSiteProfiles WRKY domain profile. 247 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g01738 325 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 18 325 - -
Bva11g01738 325 MobiDBLite consensus disorder prediction 188 226 - -
Bva11g01738 325 SMART WRKY_cls 252 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01738 Bva-Chr11 15595862 15598309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01738 19 310 WRKY Transcription Factor Family AT2G24570 47.097 2.75e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva11g01738 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01738 - - pop:7462595 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01738 11 15595862 15598309 Bva11g01738 11 15595862 15598309 ECH