Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva11g01738 | ATGGCCGTGGAGCTCATGATGGGTTATAGAAACGATAATTTCACAGCCAAAGGCGAAGAGAATGCTGTTCAAGAAGCAGCATCTGGGTTAGAGAGCGTTGAGAAGCTCATCAGGTTGCTTTCTCAGAATCAACAACAATTACAGtcatcttcaacttcaaaatcTTCCATGGAAATGGAGATGGTTGCAGACGCCGCCGTTTCCAAGTTCAAGAAGGTAATTTCACTTCTGGGTCGAACTAGAACCGGCCACGCTCGCTTTAGAAGAGCCCCTTTGGCTCCACCTGTTCATCACACCCCGGAAACTCAACCTTCTGAACCCAAAGTTTATTATGCGACTCCGTTGCAGCAGATCCCACCAACCCATCATCAACACCAGACACACAGCGACCACTGTTTGATCCCAAAAAATGGGGTCATTGAGAGGAAAGACTCGTCCAAGAGCATCAATTTCTCATATTCCTCTGCTGCAAATTCATTCATATCGTCTCTCACTGGCGGTACTGATAGTATACAGCCGTCATCTTCGTCGCCGGCAACAGCTTTCCAGATCACAAATCTATCTCAGGTCTCTTCAGCCGGAAAGCCTCCACTTTCCTCGTCTTCATTGAAGAGGAAGTGTAGCTCGGAAAATTTAGGTTCAGGCAAGTGCGGTAGTTCCTCCGGCCGCTGCCATTGTTCAAAAAAGAGTAGAAAAATGAGATTGAAGAGGGTGGTCAGGGTGCCAGCAATAAGCTTGAAGATGGCTGATATTCCACCCGACGATTATTCTTGGAGAAAGTACGGGCAGAAACCTATCAAGGGATCCCCTCATCCAAGGGGTTACTACAAGTGCAGCAGCGTGAGAGGGTGTCCAGCGCGCAAACACGTAGAGAGAGCTCTGGACGACCCATCTATGCTAGTAGTTACCTACGAAGGAGAGCACAATCACTCGCTCTCTGCGGCCGAAACCAGTAATCTTATCCTAGAATCTTCTTA | 977 | 0.4719 | MAVELMMGYRNDNFTAKGEENAVQEAASGLESVEKLIRLLSQNQQQLQSSSTSKSSMEMEMVADAAVSKFKKVISLLGRTRTGHARFRRAPLAPPVHHTPETQPSEPKVYYATPLQQIPPTHHQHQTHSDHCLIPKNGVIERKDSSKSINFSYSSAANSFISSLTGGTDSIQPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSGRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAAETSNLILESS | 325 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva11g01738 | 325 | Pfam | Plant zinc cluster domain | 204 | 250 | IPR018872 | - | |
Bva11g01738 | 325 | Gene3D | WRKY domain | 237 | 313 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva11g01738 | 325 | SUPERFAMILY | WRKY DNA-binding domain | 249 | 312 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva11g01738 | 325 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 18 | 325 | IPR044810 | GO:0003700 | |
Bva11g01738 | 325 | MobiDBLite | consensus disorder prediction | 188 | 224 | - | - | |
Bva11g01738 | 325 | Pfam | WRKY DNA -binding domain | 254 | 310 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva11g01738 | 325 | Coils | Coil | 30 | 50 | - | - | |
Bva11g01738 | 325 | ProSiteProfiles | WRKY domain profile. | 247 | 313 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva11g01738 | 325 | PANTHER | WRKY TRANSCRIPTION FACTOR 7-RELATED | 18 | 325 | - | - | |
Bva11g01738 | 325 | MobiDBLite | consensus disorder prediction | 188 | 226 | - | - | |
Bva11g01738 | 325 | SMART | WRKY_cls | 252 | 312 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva11g01738 | Bva-Chr11 | 15595862 | 15598309 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva11g01738 | 19 | 310 | WRKY Transcription Factor Family | AT2G24570 | 47.097 | 2.75e-71 | 222 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Bva11g01738 | WRKY | 3.1e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva11g01738 | - | - | pop:7462595 | 400.208 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva11g01738 | 11 | 15595862 | 15598309 | Bva11g01738 | 11 | 15595862 | 15598309 | ECH |