Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01731 ATGTGGGATCTCAATGACTCGCCCGATCAGAGAAAAGACGACGAATCCGAAGAAGGTTGTTCATCGTTGAAGACTTCCATCGATGGAGATGATGATAAAGGTAAGCAGGTTGGATCTGTTTCCAATTCGAGCTCCTCAGCGGTTGTAATCGAAGACGGATCGGACGAAGAAGACGCCGAGAGGGGAGGAAGCAGAACATTCAAGAAAAGAAGCAGTAAGATATTCGGGTTTTCCGTGACACACGACGAGTCCATGGATACTGACCCACCCGTGACCCGACAGTTTTTTCCGGTGGAGGAGCCTGACATGGCAGTGACTTCGTCTGGTGGCAGCTCCGCCTTCCCTCGGGCTCACTGGGTTGGCGTCAAATTCTGCCAATCAGAAACCCTTGGCACCGGAAAATCTGTGGAAGTGTCGCAGCCCATGAAGAAGAGCCGGCGTGGGCCCAGGTCAAGGAGCTCCCAGTATCGAGGTGTTACCTTTTACAGAAGAACCGGACGATGGGAGTCACATATATGGGATTGTGGAAAACAAGTCTATCTGGGTGGATTCGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCAATCAAGTTCCGGGGAGTAGACGCAGACATAAACTTCAACATAGAAGACTACGAAGAAGACTTGAAGCAGATGAGTAATCTAACCAAGGAAGAGTTCGTCCACGTACTTCGCCGACAAAGCACTGGATTTCCGAGAGGAAGCTCCAAGTATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTAGGCAAAAAGTACGTTTATCTGGGCTTGTTTGACACTGAGGTTGAAGCTGCAAGGGCTTATGATAAAGCAGCAATAAAATGCAACGGCAAAGATGCTGTCACCAATTTTGATCCCAGCATATATGAGAATGAGCTTAATTCTGAATCTTCAGGCAATGCTGCAGATCACAACCTGGATTTAAGTTTGGGGAATTCAAGCTCGAAGCACAACAATCATCATGTATTAGGGAATGATAATACCCGTAATGCTGTTATGGATCAACACATGCTACCAGAATCTAACTGGCTGAATGGGGGATTCAGGCCTAAGatgaATCTGCTACCAGAACCATGTAGTGCTAAGAGCAACATGGAAGCTCGTGGAGGAGATGGGCATGGAGAGAATGAAACCTTGAGGCTGCTGAATCAAACCCACCTTCAATCTGCAGCTTCTAATGAAATGCAAAGATATGGTCCCTACAGAACCAGTGTGGAGCCACAAATGCTTCACAATTTTGCACCACATCTTCACTCACCAAATTTTCATCATTTTCCAAGCAGCAGCAATGGAGGTCGAGTAGGGAGTGATCTTTCATTGTCAAGGAAcgatcatcatcatcaacaacAGTGGCAATCCGGGCCTTCTCAATTTTTAGCAAGTGCTGCAGCATCATCAGGATTCCCACCGCAGATAATAAGACCCTCCCAAGGTTGGCTGCAGAAAAATGGGTTCCACGCCCTCACGAGACCCTCCTA 1535 0.4697 MWDLNDSPDQRKDDESEEGCSSLKTSIDGDDDKGKQVGSVSNSSSSAVVIEDGSDEEDAERGGSRTFKKRSSKIFGFSVTHDESMDTDPPVTRQFFPVEEPDMAVTSSGGSSAFPRAHWVGVKFCQSETLGTGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYENELNSESSGNAADHNLDLSLGNSSSKHNNHHVLGNDNTRNAVMDQHMLPESNWLNGGFRPKMNLLPEPCSAKSNMEARGGDGHGENETLRLLNQTHLQSAASNEMQRYGPYRTSVEPQMLHNFAPHLHSPNFHHFPSSSNGGRVGSDLSLSRNDHHHQQQWQSGPSQFLASAAASSGFPPQIIRPSQGWLQKNGFHALTRPS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01731 511 SUPERFAMILY DNA-binding domain 246 306 IPR016177 GO:0003677
Bva11g01731 511 MobiDBLite consensus disorder prediction 1 35 - -
Bva11g01731 511 MobiDBLite consensus disorder prediction 1 67 - -
Bva11g01731 511 MobiDBLite consensus disorder prediction 135 155 - -
Bva11g01731 511 MobiDBLite consensus disorder prediction 440 482 - -
Bva11g01731 511 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 508 - -
Bva11g01731 511 CDD AP2 246 306 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 Gene3D AP2/ERF domain 246 305 IPR036955 GO:0003700|GO:0006355
Bva11g01731 511 Gene3D AP2/ERF domain 154 213 IPR036955 GO:0003700|GO:0006355
Bva11g01731 511 MobiDBLite consensus disorder prediction 36 50 - -
Bva11g01731 511 CDD AP2 155 212 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 MobiDBLite consensus disorder prediction 464 482 - -
Bva11g01731 511 MobiDBLite consensus disorder prediction 311 339 - -
Bva11g01731 511 Pfam AP2 domain 246 295 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 Pfam AP2 domain 155 203 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 508 - -
Bva11g01731 511 ProSiteProfiles AP2/ERF domain profile. 247 304 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 SUPERFAMILY DNA-binding domain 154 212 IPR016177 GO:0003677
Bva11g01731 511 MobiDBLite consensus disorder prediction 441 456 - -
Bva11g01731 511 ProSiteProfiles AP2/ERF domain profile. 155 211 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 SMART rav1_2 155 217 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 SMART rav1_2 247 310 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 PRINTS Ethylene responsive element binding protein signature 286 306 IPR001471 GO:0003700|GO:0006355
Bva11g01731 511 PRINTS Ethylene responsive element binding protein signature 248 259 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01731 Bva-Chr11 15549319 15552872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01731 1 511 AP2-EREBP Transcription Factor Family AT4G36920 54.291 3.01e-141 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bva11g01731 AP2 8.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01731 K09284 - gmx:100792442 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00587 08 3029464 3033085 Bva11g01731 11 15549319 15552872 BWGD
Bva11g01731 11 15549319 15552872 Bva11g01731 11 15549319 15552872 ECH